PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022998610.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 763aa MW: 85368.5 Da PI: 6.6363 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 67.7 | 1.5e-21 | 100 | 155 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r+k +++t+eq++e+e+lF+++++p++++r++L+k+lgL+ rqVk+WFqNrR++ k XP_022998610.1 100 RKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIK 155 7999************************************************9877 PP | |||||||
2 | START | 203.5 | 9e-64 | 274 | 495 | 5 | 206 |
HHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS START 5 eaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 +a++el ++a+ +ep+W +s e++n+de+l++f +++ +++ea+r+++vv+m++ +l ++++d + qW+e+++ ka+t++vi XP_022998610.1 274 QALEELKTMAATNEPLWIRSIetgrEILNYDEYLKTFHLKNSntcwlkRHIEASRDTTVVFMEPSRLIQSFMDEN-QWKEMFPsmisKAATIDVI 367 6789999******************************8877799*******************************.******************* PP CTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE-- CS START 86 ssg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlk 173 ++g ga+qlm+ e q+l+plvp R+ +f+R+++ql ++w+ivdvS+d+ ++ + ++s+++ +++pSg++i+++sngh+kvt+veh +++ XP_022998610.1 368 CNGevanwnGAVQLMFVEVQLLTPLVPtREIYFIRHCKQLDTEQWAIVDVSIDNVDDINIDASLMKYRKRPSGCIIKDESNGHCKVTMVEHLECE 462 **********************************************************99*********************************** PP SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 174 grlphwllrslvksglaegaktwvatlqrqcek 206 + ++h+l+r +v++g+a+ga++w+atlq qce+ XP_022998610.1 463 KTQVHNLYRTIVNNGTAFGARHWMATLQLQCER 495 *******************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 763 aa Download sequence |
MLADMSNNNN RLAFTKDFFS SPALSLTLAG IFRRGEMAEK GDVEMEEVDD GSGEVRRDDA 60 AEVSSENLGP VRSRSDDDFE GGGVHEENEE GDGGCLVKRR KKYHRHTTEQ IREMEALFKE 120 SPHPDEKQRQ QLSKRLGLSP RQVKFWFQNR RTQIKAIQER HENTLLKAEM EKLREENKAM 180 RELTKKKVGC PNCGTANAAE DHTAFTTTEQ LRIKNAKLKA EVEKLRAALG KHSQSSISPS 240 YSSGNDQETN RNCLDFYTGI FGLEKSRIME RVHQALEELK TMAATNEPLW IRSIETGREI 300 LNYDEYLKTF HLKNSNTCWL KRHIEASRDT TVVFMEPSRL IQSFMDENQW KEMFPSMISK 360 AATIDVICNG EVANWNGAVQ LMFVEVQLLT PLVPTREIYF IRHCKQLDTE QWAIVDVSID 420 NVDDINIDAS LMKYRKRPSG CIIKDESNGH CKVTMVEHLE CEKTQVHNLY RTIVNNGTAF 480 GARHWMATLQ LQCERLAFFM ATNIPIKDST GVATLAGRKS TLKLAQRMSS SFSQAVAASS 540 YQTWTKVVGK TGEDIRVCSR KNLSDPGEPI GVILCAVFSL WLPVPPHTLF HFLRDDARRN 600 EWDAMFGGDK VDSIANLAKG QDRGNSVSIQ TRGSKESSSS SMWILQDTST NSSESMVVYS 660 GVDVSGMQSV MTGCDSGSLT ILPSGFSILP DGAESRSLLI TRQKDHKSSD THGGALLTAA 720 VQIVTDASPS AKPTVDSVEY VKSIVCCTIK NIRSSLGCCE DDC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79840.1 | 0.0 | HD-ZIP family protein |