PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022998494.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 228aa MW: 25606.6 Da PI: 7.4767 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 47.6 | 2.7e-15 | 82 | 136 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HH.HHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsae.ereeLAkklgLterqVkvWFqNrRakek 56 k+ ++ +eq Le++F+ +++++ + +++e A++l+L rqV vWFqNrRa+ k XP_022998494.1 82 KKLRLFREQSAFLEDCFKDHHTLDPQkQKAEVARRLNLRPRQVEVWFQNRRARTK 136 55666789***************9752789***********************98 PP | |||||||
2 | HD-ZIP_I/II | 114.2 | 7.8e-37 | 81 | 172 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLep.erKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rl +eq+++LE++F+ +++L+p ++K+e+ar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en++L+ke ++Lr +lk XP_022998494.1 81 RKKLRLFREQSAFLEDCFKDHHTLDPqKQKAEVARRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKNCCQTLTQENRKLRKELQDLR-ALK 172 69***********************94589**********************************************************9.555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MELGLRLGDQ QQTHNHNPKL LHLALLPPTP TPDGGGGDGE SPLVCSSLEL GLYEVEDHHQ 60 GNSDRGCSRG SDEDDQILGS RKKLRLFREQ SAFLEDCFKD HHTLDPQKQK AEVARRLNLR 120 PRQVEVWFQN RRARTKLKQT EVDCEYLKNC CQTLTQENRK LRKELQDLRA LKTTDSLFMH 180 SPATTLTMCA SCERAALIQP VNSKASGFSF TSNGSSSFSP TDPSTNNN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 80 | 86 | SRKKLRL |
2 | 131 | 139 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 6e-60 | HD-ZIP family protein |