PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022998482.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 254aa MW: 29167.4 Da PI: 6.8626

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022998482.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	88.4	3.9e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien rqvtfskRr+g+lKKA+EL +LCdaevaviifs+tgkl+e+ss XP_022998482.1 9 KRIENANSRQVTFSKRRAGLLKKAQELAILCDAEVAVIIFSNTGKLFEFSS 59 79***********************************************96 PP
2	K-box	62.8	1.3e-21	92	174	15	99
K-box 15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ ++e+++L++ei +Lq +q +llG+dL+ L +keLq+LeqqL+++l +++kK++ll+eq+e+++ e+++ en++Lr+++ XP_022998482.1 92 KQEHEEVDNLRDEITTLQMKQLQLLGKDLTGLGFKELQNLEQQLNEGLLLVKEKKEQLLMEQLEQSR--EQRAMLENETLRRQVS 174 56689**********************************************************9765..6666667888999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MGRGKIEIKR IENANSRQVT FSKRRAGLLK KAQELAILCD AEVAVIIFSN TGKLFEFSSS 60 GMKHTLSRYN RCIESSETPI DGHKAEYLHL QKQEHEEVDN LRDEITTLQM KQLQLLGKDL 120 TGLGFKELQN LEQQLNEGLL LVKEKKEQLL MEQLEQSREQ RAMLENETLR RQVSELRCLF 180 PPVDCPLPAY LEYCSLEKKK VGIRIPDVIC NSEIERGDSD TTLHLGLPSH VYCKRKEAER 240 DTHSNDSRSQ MGLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13790.1	9e-62	MIKC_MADS family protein