PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022998050.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 697aa    MW: 77194.4 Da    PI: 6.9413
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022998050.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.72.7e-202378156
                    TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    r++ +++t++q+++Le++F+++++p++++r +L+++lgL  rq+k+WFqNrR+++k
  XP_022998050.1 23 RKRYHRHTANQIQRLEAMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMK 78
                    789999***********************************************998 PP
2START174.75.8e-552104342205
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     +a  a+ el+++ + +ep+W+ks+    + ++ +++ q f+++++      +++e++r+sgvv+m++a+lv  ++d++ +W+e +     +a t+
  XP_022998050.1 210 VATNAMGELLRLCQTNEPLWMKSRsdgrDVLDLKTYEQAFPRANAplenlhFRTEVSRDSGVVIMNSATLVDVFMDSN-KWSELFLtivsSARTI 303
                     7788999*****************9999999999999***99999*********************************.99999999999***** PP

                     EEECTT.......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE- CS
           START  83 evissg.......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwveh 169
                     evissg       g lqlm+ elq+lsplvp R f+++Ry++q ++g w++vdvS +++   +   s   +++ pSg+li++++ng+skvtw+eh
  XP_022998050.1 304 EVISSGmlgshhnGSLQLMYLELQLLSPLVPtRHFYVLRYCQQIEQGMWAVVDVSYNVTGGSQ-MVSHSQCRRSPSGCLIQDMPNGYSKVTWIEH 397
                     *********************************************************999988.577777889********************** PP

                     EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
           START 170 vdlkgrlp.hwllrslvksglaegaktwvatlqrqce 205
                     v+++++   hwl+r l++sgla+ga +w+atlqr  e
  XP_022998050.1 398 VEVEDKGStHWLFRDLIHSGLAFGAERWLATLQRTSE 434
                     ***999888************************9877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 697 aa     Download sequence    
MEFGTGGGAG WDNDSSSDPR RSRKRYHRHT ANQIQRLEAM FKECPHPDEK QRLQLSRELG  60
LAPRQIKFWF QNRRTQMKAQ HERADNSALR AENDKIRCEN IAIREALKNV ICPSCGGPPL  120
HDAYFDEHKL RMENAHLKEE LDRVSSMAAK YIGRPISQPS HFSSLELSMS SFSSYEMGCS  180
SLDLDLLPVS SSSVLPIHLS NMDKTLMSEV ATNAMGELLR LCQTNEPLWM KSRSDGRDVL  240
DLKTYEQAFP RANAPLENLH FRTEVSRDSG VVIMNSATLV DVFMDSNKWS ELFLTIVSSA  300
RTIEVISSGM LGSHHNGSLQ LMYLELQLLS PLVPTRHFYV LRYCQQIEQG MWAVVDVSYN  360
VTGGSQMVSH SQCRRSPSGC LIQDMPNGYS KVTWIEHVEV EDKGSTHWLF RDLIHSGLAF  420
GAERWLATLQ RTSERFACSM VTSSSSQDLG GVIPSLEGRR SMMKLARRMV NNFCASISTS  480
HGHRWTTLSG TDEVGVCVSV HKSMDPGQRN GVVLSAATTI WLPVPPQTIF NFFKNDRTRS  540
QWDVLSDGNP VQEVAHITNG SHPGNCISVL RALNSTQNNM LILQESCIDS SGSLVVYCPV  600
DLPAMNLAMS GEDPSSIPLL PSGFAILPDG RQDQGEGASS SSDVQRSGGS LVTVAFQILV  660
SSLPSGKLNL ESVTTVNNLI STTVHQIKTA LNCHSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17920.10.0HD-ZIP family protein