PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022997502.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB_related | ||||||||
Protein Properties | Length: 100aa MW: 11267.6 Da PI: 8.7154 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25 | 4.3e-08 | 12 | 57 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 W+ + + +a + + ++ +W + a+ +g g+t++++k ++ + XP_022997502.1 12 CWSSKQNKVFENALTVYDKDspdRWQKLASSVG-GKTAEEVKRHYEM 57 6********************************.***********76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 100 aa Download sequence |
MTSSSSSSSS SCWSSKQNKV FENALTVYDK DSPDRWQKLA SSVGGKTAEE VKRHYEMLVE 60 DVHNIETGRV PLPNYSKPSK HCSSNTFLDE EQRLKGLKLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 7e-33 | MYB_related family protein |