PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022997362.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 961aa MW: 106679 Da PI: 5.3081

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022997362.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.2	1.9e-18	38	84	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l XP_022997362.1 38 KGQWTAEEDEILRKAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 84 799**************************9.**********986 PP
2	Myb_DNA-binding	65.6	9.3e-21	90	136	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde +v++v+++G++ W+tIa++++ gR +kqc++rw+++l XP_022997362.1 90 KGPWSKEEDETIVELVQKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 136 79****************************.***********97 PP
3	Myb_DNA-binding	48.7	1.7e-15	142	184	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ XP_022997362.1 142 KEAWTQEEELALIRAHQIYGNR-WAELTKFLP-GRTDNAIKNHWN 184 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 961 aa Download sequence
MESDPPVCTP SDVPGDSGRS IQALHSRRTS GPTRRSTKGQ WTAEEDEILR KAVQRFKGKN 60 WKKIAECFKD RTDVQCLHRW QKVLNPELVK GPWSKEEDET IVELVQKYGP KKWSTIAQHL 120 PGRIGKQCRE RWHNHLNPAI NKEAWTQEEE LALIRAHQIY GNRWAELTKF LPGRTDNAIK 180 NHWNSSVKKK LDSYLASGLL EQYQPLHHHA LQSSLPILSS SRVQSSIDDS CLRGTETEDI 240 SEVTQTSATV PRTKEECQLA EDVLIKEETN STPHCLEQYH GSLDDITFSI PEMLRELGCY 300 AKPPNQSLSQ DCRTSSTGDN QYNLYGLPNI SSLELGQELS QFQAIGSQEA ENISHQTSAG 360 LRASTIENMA RASDKPEHML ISDYECCRVL FSDAINNESF LSESTTDARD MVEPSGYAHP 420 LQCRSSSTDM QESNRNLSLQ SEVLDNSCSQ RFLAPLLVSA NDDTYVYTSE TSHLFESLEQ 480 ELVGDGQNGF IYTNESADSP PNDGLKNTEL QKQQGSKDSS KLVPVNTFSS EPKTAESFPS 540 FSGRENIHSD QQDLRALCYE PPRFPSLDVP FLSCDLAPSA SDMQQEYSPL GIRQLMMSSM 600 NCLTPFKPWN SPYRDDSPVA VLKSAAKTFT NTPSILKKRH RELLSPLSEK RCDKKQEIDV 660 GISRTSQSNP PSHQTINSRN SEDKENISPE RTSYSCSFQE NKMQELVGQI VQQPSLILVE 720 CDSNDETSEI PCSRTSTALQ DQEFPKLSND HCAVANCSVA SGTSHGSRPP ATVPPEAIGD 780 NASKESSIEP ATIFGGTPFN RSIESPSAWK SPWFINSFLF GSRMDTDVPM EDVGYLMSPG 840 DRSYDAIGLM KQVGEHTAAA CANAQEVLGN ETPQSLLKGR RGKYENQTKE KNHVSNSLQG 900 VRSTLTLDIM AERRILDFSE CGTPGKATEN GKSSTATATA TATATARSFS SPSSYLLKGC 960 R

Sequence ? help Back to Top

Protein Sequence Length: 961 aa Download sequence

MESDPPVCTP SDVPGDSGRS IQALHSRRTS GPTRRSTKGQ WTAEEDEILR KAVQRFKGKN  60
WKKIAECFKD RTDVQCLHRW QKVLNPELVK GPWSKEEDET IVELVQKYGP KKWSTIAQHL  120
PGRIGKQCRE RWHNHLNPAI NKEAWTQEEE LALIRAHQIY GNRWAELTKF LPGRTDNAIK  180
NHWNSSVKKK LDSYLASGLL EQYQPLHHHA LQSSLPILSS SRVQSSIDDS CLRGTETEDI  240
SEVTQTSATV PRTKEECQLA EDVLIKEETN STPHCLEQYH GSLDDITFSI PEMLRELGCY  300
AKPPNQSLSQ DCRTSSTGDN QYNLYGLPNI SSLELGQELS QFQAIGSQEA ENISHQTSAG  360
LRASTIENMA RASDKPEHML ISDYECCRVL FSDAINNESF LSESTTDARD MVEPSGYAHP  420
LQCRSSSTDM QESNRNLSLQ SEVLDNSCSQ RFLAPLLVSA NDDTYVYTSE TSHLFESLEQ  480
ELVGDGQNGF IYTNESADSP PNDGLKNTEL QKQQGSKDSS KLVPVNTFSS EPKTAESFPS  540
FSGRENIHSD QQDLRALCYE PPRFPSLDVP FLSCDLAPSA SDMQQEYSPL GIRQLMMSSM  600
NCLTPFKPWN SPYRDDSPVA VLKSAAKTFT NTPSILKKRH RELLSPLSEK RCDKKQEIDV  660
GISRTSQSNP PSHQTINSRN SEDKENISPE RTSYSCSFQE NKMQELVGQI VQQPSLILVE  720
CDSNDETSEI PCSRTSTALQ DQEFPKLSND HCAVANCSVA SGTSHGSRPP ATVPPEAIGD  780
NASKESSIEP ATIFGGTPFN RSIESPSAWK SPWFINSFLF GSRMDTDVPM EDVGYLMSPG  840
DRSYDAIGLM KQVGEHTAAA CANAQEVLGN ETPQSLLKGR RGKYENQTKE KNHVSNSLQG  900
VRSTLTLDIM AERRILDFSE CGTPGKATEN GKSSTATATA TATATARSFS SPSSYLLKGC  960
R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein