PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022997186.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GATA | ||||||||
Protein Properties | Length: 350aa MW: 38326.8 Da PI: 4.7207 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 46.3 | 6e-15 | 202 | 238 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+ + Tp +Rrgp g +tLCnaCGl+++ kg+ XP_022997186.1 202 CQHCGVNEnnTPAMRRGPAGLRTLCNACGLMWANKGT 238 *******999************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence |
MAAANPQPLQ ARPFQEHVQV PTMMGNDDGE YEDDGGGGGD VMDDVEGAHM TSVSVVKHGG 60 LVMVSRTSEL TLSFEGEVYV FPAVTPEKVQ AVLLLLGGRD VPTGVPTMEV PYDDNNRGMV 120 DTPKRSNLSR RIASLVRFRE KRKERCFDKK IRYTVRKEVA QRMHRKNGQF ASLKEGSGAS 180 SWESAHSCLQ DGSRSETVLR KCQHCGVNEN NTPAMRRGPA GLRTLCNACG LMWANKGTLR 240 DLSKGGRNVS LDHMEPETPM DVKPTIMEGE FSGIQDEHGT PEDPGKTMTE GSSNPSLDPV 300 EEDINETTVE LTNSLPMQIA NHSTNGDEQE PLIELANPSD TDVDIPTNFD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 121 | 126 | DTPKRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 1e-71 | GATA family protein |