PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022997002.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

AP2

Protein Properties

Length: 677aa MW: 73980.5 Da PI: 6.9474

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022997002.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	3.8e-16	312	371	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022997002.1 312 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 371 78*****************988886678446***********************98 PP
2	AP2	45.9	1.4e-14	414	465	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s ++GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022997002.1 414 SVFRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 465 689*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 677 aa Download sequence
MKSMNENENN NNNNNNNNNN SSSWLGFSLS PHMKMEVTSS DHPYNHHHSH SASNAFYLSP 60 HYNNNTEIFY GIAENASLHH SAAASLSVMP LKSDGSLCIM EALSRSQTEG MVPSSSPKLE 120 DFLGGATMGG RGYFNQNAES EPDREHSLDL LHRPIRENQQ QQQQILMQNT HQYYSGLVPS 180 SIGIGGCDPQ ILPADDDEIP CLRNWVSRSH YAGAHNSLDQ QITGGGGGAL VHDGGSGGYS 240 VSIGGMGCGE LQSLSLSMSP GSQSSSFTAS GQISLTGGDG TVVETKKRGP GKLCQKQPVH 300 RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ TRKGRQVYLG GYDMEEKAAR 360 AYDLAALKYW GPSTHINFPL ENYQTELEEM KNMSRQEYVA HLRRKSSGFS RGASVFRGVT 420 RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGVNAVT NFDISRYDVE 480 RIMASNTLLA GELARRNKEV VVDPRTDAAA AAVAYDSSVA SNNNGGIEMN PDGNGTDWKM 540 ALYQNPSHQQ HQQAAATCVA ESLDHHHNNK SMGDYPNASF SMALQNLIGI EALNTTNSHG 600 IEDDLNKQVT HFSNSSSLVT SLSSSREGSP DKTNASMASK LIGATSGVGS WYPTPQQLRP 660 TAISMAHLPV FAAWNDT

Sequence ? help Back to Top

Protein Sequence Length: 677 aa Download sequence

MKSMNENENN NNNNNNNNNN SSSWLGFSLS PHMKMEVTSS DHPYNHHHSH SASNAFYLSP  60
HYNNNTEIFY GIAENASLHH SAAASLSVMP LKSDGSLCIM EALSRSQTEG MVPSSSPKLE  120
DFLGGATMGG RGYFNQNAES EPDREHSLDL LHRPIRENQQ QQQQILMQNT HQYYSGLVPS  180
SIGIGGCDPQ ILPADDDEIP CLRNWVSRSH YAGAHNSLDQ QITGGGGGAL VHDGGSGGYS  240
VSIGGMGCGE LQSLSLSMSP GSQSSSFTAS GQISLTGGDG TVVETKKRGP GKLCQKQPVH  300
RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL WDNSCKKEGQ TRKGRQVYLG GYDMEEKAAR  360
AYDLAALKYW GPSTHINFPL ENYQTELEEM KNMSRQEYVA HLRRKSSGFS RGASVFRGVT  420
RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGVNAVT NFDISRYDVE  480
RIMASNTLLA GELARRNKEV VVDPRTDAAA AAVAYDSSVA SNNNGGIEMN PDGNGTDWKM  540
ALYQNPSHQQ HQQAAATCVA ESLDHHHNNK SMGDYPNASF SMALQNLIGI EALNTTNSHG  600
IEDDLNKQVT HFSNSSSLVT SLSSSREGSP DKTNASMASK LIGATSGVGS WYPTPQQLRP  660
TAISMAHLPV FAAWNDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-128	AP2 family protein