PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022996849.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 378aa MW: 42293.1 Da PI: 5.0893

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022996849.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	25.1	4.8e-08	37	116	33	128
NAM 33 vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 +++++ y+++P++Lp + wy+ + + g + g+Wk + d ++++ +++ +g +++ +y+g+ap +kt Wvm+ y XP_022996849.1 37 NVHDINPYQCKPENLP------DGVWYYVEGNVDA---G------SSFGRWKLKDGDCKLYT-NSSFTGGRTSYEYYEGQAPYESKTAWVMQKYW 115 5889999999999998......3356655444332...2......34588*999*9.9999*************************7 PP NAM 128 l 128 + XP_022996849.1 116 M 116 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MTPSTVTSST ILDLFSTDDE TFLALWRIRS GGSFPANVHD INPYQCKPEN LPDGVWYYVE 60 GNVDAGSSFG RWKLKDGDCK LYTNSSFTGG RTSYEYYEGQ APYESKTAWV MQKYWMNQMD 120 LRATIEQEET SSLCKVFLGD EQFQNNEMIQ KTEFSSILNS EPVLNHQLVV TDGSTSNNMA 180 NGLTSKSKMN EDDKMIELAD AGKRLDNHLE DIHPEMDYCL GDDYLELLDL DNPTSSSSSS 240 ENSSCLSMSS NEDFVTMDVL CDVEREINHD RGRRDAACIR SSAPFKLKKE VVHQVASDSL 300 VTIIRSHPAA KETPKTDSSA NMKLPSQSKK EGYRMKGASS SCHNKVSNGE ETGVDGGKKR 360 VGRRGKSPKK KYFCFFAL

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MTPSTVTSST ILDLFSTDDE TFLALWRIRS GGSFPANVHD INPYQCKPEN LPDGVWYYVE  60
GNVDAGSSFG RWKLKDGDCK LYTNSSFTGG RTSYEYYEGQ APYESKTAWV MQKYWMNQMD  120
LRATIEQEET SSLCKVFLGD EQFQNNEMIQ KTEFSSILNS EPVLNHQLVV TDGSTSNNMA  180
NGLTSKSKMN EDDKMIELAD AGKRLDNHLE DIHPEMDYCL GDDYLELLDL DNPTSSSSSS  240
ENSSCLSMSS NEDFVTMDVL CDVEREINHD RGRRDAACIR SSAPFKLKKE VVHQVASDSL  300
VTIIRSHPAA KETPKTDSSA NMKLPSQSKK EGYRMKGASS SCHNKVSNGE ETGVDGGKKR  360
VGRRGKSPKK KYFCFFAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	4e-10	NAC family protein