PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022996848.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NAC | ||||||||
Protein Properties | Length: 391aa MW: 43773.9 Da PI: 5.0893 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 25 | 5.2e-08 | 37 | 116 | 33 | 128 |
NAM 33 vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 +++++ y+++P++Lp + wy+ + + g + g+Wk + d ++++ +++ +g +++ +y+g+ap +kt Wvm+ y XP_022996848.1 37 NVHDINPYQCKPENLP------DGVWYYVEGNVDA---G------SSFGRWKLKDGDCKLYT-NSSFTGGRTSYEYYEGQAPYESKTAWVMQKYW 115 5889999999999998......3356655444332...2......34588***999*****9.9999***************************7 PP NAM 128 l 128 + XP_022996848.1 116 M 116 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 391 aa Download sequence |
MTPSTVTSST ILDLFSTDDE TFLALWRIRS GGSFPANVHD INPYQCKPEN LPDGVWYYVE 60 GNVDAGSSFG RWKLKDGDCK LYTNSSFTGG RTSYEYYEGQ APYESKTAWV MQKYWMNQMD 120 LRATIEQEPI SQLLVWLGNM QETSSLCKVF LGDEQFQNNE MIQKTEFSSI LNSEPVLNHQ 180 LVVTDGSTSN NMANGLTSKS KMNEDDKMIE LADAGKRLDN HLEDIHPEMD YCLGDDYLEL 240 LDLDNPTSSS SSSENSSCLS MSSNEDFVTM DVLCDVEREI NHDRGRRDAA CIRSSAPFKL 300 KKEVVHQVAS DSLVTIIRSH PAAKETPKTD SSANMKLPSQ SKKEGYRMKG ASSSCHNKVS 360 NGEETGVDGG KKRVGRRGKS PKKKYFCFFA L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 7e-09 | NAC family protein |