PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022996820.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Dof
Protein Properties Length: 252aa    MW: 26468.1 Da    PI: 7.8192
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022996820.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.41.5e-382583462
          zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    + l+cprCds ntkfCyynny+lsqPr+fCk+CrryWt+GG+lr+vPvGgg+rkn k+s
  XP_022996820.1 25 DPLPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDVPVGGGSRKNSKRS 83
                    6789***************************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MPSESANRSS RPQHSMAFPP PPQSDPLPCP RCDSLNTKFC YYNNYNLSQP RHFCKSCRRY  60
WTHGGTLRDV PVGGGSRKNS KRSRYHNINN TNTSSSVSVS VSSTSVSSST SASSSSASLL  120
PAPTLNNDIN VVDVNLNDTM PAPGSFTSLL SSQASGFLAL GGYASASGSG HAPATFDDMG  180
FALGRGLWGT TTCTYPEVGD LVGSYSAAVA PETSSYNTWQ MNASDGGNGG VVDGDLLGWP  240
DLAISMQGKS LK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50410.19e-32Dof family protein