PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022996617.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | TALE | ||||||||
Protein Properties | Length: 463aa MW: 51229.3 Da PI: 5.5095 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 22.4 | 2.1e-07 | 402 | 434 | 22 | 54 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + XP_022996617.1 402 WPYPTEEDKAKLVQETGLQLKQINNWFINQRKR 434 69*****************************87 PP | |||||||
2 | ELK | 26.3 | 1.7e-09 | 355 | 376 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y++++ ++++E++ XP_022996617.1 355 ELKHELKNGYKEKILDIREEIL 376 9*******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 463 aa Download sequence |
MAFRNQLSQD LPLHYENQSQ PERPLSANTL RSILSDQLTD HSQADDGSKP EHPLQSTPNW 60 LNSALLRNQA PHSHFSDETT ATAADNVDTD FLNLHTTAAN SAVSHPSGQW LSRAILHRDH 120 SDVLDEVADA ADAMIGATTL SRESDDLKNN SSGGGGEGAN NSDDVAVESD GNEGAYGGDA 180 VMNWQNARFK AEILAHPLYE QLLSAHVACL RIATPVDQLP RVDSQLARSQ NVAAKYSSFG 240 HRSQPIAGNG KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM EAVYACWEIE QSLQSLTGVS 300 PGEGTGATMS DDDEDQTDSD ANLFDGSFEG HDAMGFGPLI PTDSERSLME RVRHELKHEL 360 KNGYKEKILD IREEILRKRR AGKLPGGTTS VLKAWWQSHS NWPYPTEEDK AKLVQETGLQ 420 LKQINNWFIN QRKRNWHTNP STSTTLKTKR KSNAGEATGN NHP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25220.1 | 1e-163 | TALE family protein |