PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022996389.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 514aa MW: 57924.3 Da PI: 5.0044

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022996389.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.1	8.1e-28	279	332	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_022996389.1 279 KTKVDWSPELHRKFIQAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 332 6799***************.******************************8 PP
2	Myb_DNA-binding	42.2	1.8e-13	282	331	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_022996389.1 282 VDWSPELHRKFIQAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 331 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MVCTADDLQE WKDFPKGLRV LLLDRDSRSA TEIRAKLEEM EHVVYYCNDE KEALSAIMNT 60 PENFHIAILE MCEGNYDESF KLLGSSKDLP IIMTSDVYCL STMMKCIALG AVEFLLKPLS 120 EDKLRNIWQH VLHKAFSSTP KPEVDSAASL MQLQLESEDN NGVLEDTEGL SWIQDIVWEQ 180 EQPEGNVNSQ LNQGSSMQGC WESGDQMNCP METDCSDKDV QSNFVETTSH DLVCEDTLQE 240 RQPRLSGNNK CGVKSGPSAA EHSIQGSDVN PSAGSKSKKT KVDWSPELHR KFIQAVEQLG 300 IDRAIPSKIL ELMKVEGLTR HNVASHLQKY RMQRKHVMQR EENLTRYSMQ TNHSPPIMAY 360 PSYPYCGISM STVYRTWTQT NGHPANVNMR GPPDYRHWPQ PGTQPWNSYA GMQADAWGCP 420 VMLPSRAPYF SYPQQISASH NVYTANKGYG TPQISFDLQP NEELIDEIVN EAKRKPWSPL 480 PLGLKPPSAE ILVEELPKQG ISTLTPQINA FNPP

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MVCTADDLQE WKDFPKGLRV LLLDRDSRSA TEIRAKLEEM EHVVYYCNDE KEALSAIMNT  60
PENFHIAILE MCEGNYDESF KLLGSSKDLP IIMTSDVYCL STMMKCIALG AVEFLLKPLS  120
EDKLRNIWQH VLHKAFSSTP KPEVDSAASL MQLQLESEDN NGVLEDTEGL SWIQDIVWEQ  180
EQPEGNVNSQ LNQGSSMQGC WESGDQMNCP METDCSDKDV QSNFVETTSH DLVCEDTLQE  240
RQPRLSGNNK CGVKSGPSAA EHSIQGSDVN PSAGSKSKKT KVDWSPELHR KFIQAVEQLG  300
IDRAIPSKIL ELMKVEGLTR HNVASHLQKY RMQRKHVMQR EENLTRYSMQ TNHSPPIMAY  360
PSYPYCGISM STVYRTWTQT NGHPANVNMR GPPDYRHWPQ PGTQPWNSYA GMQADAWGCP  420
VMLPSRAPYF SYPQQISASH NVYTANKGYG TPQISFDLQP NEELIDEIVN EAKRKPWSPL  480
PLGLKPPSAE ILVEELPKQG ISTLTPQINA FNPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	2e-88	ARR-B family protein