PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022996342.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 347aa    MW: 38656.8 Da    PI: 6.7997
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022996342.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B398.93e-3152156199
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 
                     f+kv tpsdv+k++rlv+pk++ae++    ++ +e++  l +ed++g sW+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  +
  XP_022996342.1  52 FDKVVTPSDVGKLNRLVIPKQHAERFfpldSSTNEKGLLLNFEDRHGISWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDVVSFQRGvGEiGR 146
                     89***************************966778999*************************************************66699999 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l++ ++r+
  XP_022996342.1 147 DRLYIDWRRR 156
                     9999999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MDFGFNSLQN HHLRSRNGLN LEPAEEASSA AVDFDGGGGG GGGGEVEREH MFDKVVTPSD  60
VGKLNRLVIP KQHAERFFPL DSSTNEKGLL LNFEDRHGIS WRFRYSYWNS SQSYVMTKGW  120
SRFVKEKRLD AGDVVSFQRG VGEIGRDRLY IDWRRRPELP IDHHHHHHHH PIGIRPSIVM  180
PTTATAWGSL VWQPLGVTAT GYHHHPATVA PQDHTHMSRI NNNSNNNSNI NAMYDRNRGY  240
CPYGYGSVES SSSSEMVFFG RAPRLGDGLE GKNEMQPEYM SSGGGGGSMA VQESYSEEDT  300
PVKRSRLRLF GVNMEMECPI MSSSSDECDL LLSSSSNSNP KTTAPSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.18e-68B3 family protein