PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022996279.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 280aa MW: 31967 Da PI: 8.7796 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.4 | 6.7e-08 | 23 | 69 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 +WT+eE + + a + + ++ +W ++a++++ g+t +++ ++ XP_022996279.1 23 SKWTKEENKMFESALAIYDKEtpdRWLKVAAMIP-GKTVGDVIKQYRE 69 69*****************99*************.******9999986 PP | |||||||
2 | Myb_DNA-binding | 43.9 | 5.5e-14 | 125 | 169 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+++++++ ++G+g+W+ I+r + + +t+ q+ s+ qky XP_022996279.1 125 PWTEEEHKQFLRGLLKYGKGDWRNISRNFVNSKTPTQVASHAQKY 169 8*****************************9*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
METLYPSSHL STSAWFLLHN PTSKWTKEEN KMFESALAIY DKETPDRWLK VAAMIPGKTV 60 GDVIKQYREL EEDVCEIEAG RFPIPGYDLA SSFSFQFVDD RNFNVYRRKS SVGRGSDHER 120 KKGVPWTEEE HKQFLRGLLK YGKGDWRNIS RNFVNSKTPT QVASHAQKYF MRQLSGGKDK 180 RRPSIHDITT VNLTEATASE NEKLLPCLDQ NEKAGCYQKV LFDWKGATNG GLLGLGPNYG 240 DCVVSFPSGI VANGVKKEQH HQELKDAYYG TYSILHQIYR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 3e-91 | MYB family protein |