PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022996172.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 327aa    MW: 37849.8 Da    PI: 6.8778
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022996172.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM179.49.6e-5671371129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                     +ppGfrFhPtdeelv++yL+kkv++k+++l ++ik+vd+y++ePwdL++    + +++++ewyfFs++dkky+tg+r+nratk+g+Wkatg+dk+
  XP_022996172.1   7 VPPGFRFHPTDEELVDYYLRKKVASKRIDL-DIIKDVDLYRIEPWDLQElcklAGSEDQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKA 100
                     69****************************.99**************9545433333667*********************************** PP

             NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                     +++ ++ lvg++ktLvfykgrap+g+k+dW+mheyrle
  XP_022996172.1 101 IYA-RHCLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 137
                     ***.999*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MNCIPHVPPG FRFHPTDEEL VDYYLRKKVA SKRIDLDIIK DVDLYRIEPW DLQELCKLAG  60
SEDQNEWYFF SHKDKKYPTG TRTNRATKAG FWKATGRDKA IYARHCLVGM RKTLVFYKGR  120
APNGQKSDWI MHEYRLETNE NATPQEEGWV VCRVFKKRMP TVRKGGDYGS PCWYDDQVSF  180
MPELDSPTTQ IFRHPSYPCK QELELHFHAP PHDPVFLQLP HLESPKLPPS SVPTANSLLP  240
YAYDRDTALA PLYGMEHAVD HMTDWRVMEK FVASQLSNDQ DLKQPNYSDG AIFQVPQSSA  300
GPECEHKDIT PEFARASPSS HQVDMWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.11e-135NAC family protein