PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022996123.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 811aa    MW: 90147.4 Da    PI: 6.2123
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022996123.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.62.9e-2091146156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t+ q++e+e+lF+++++p+ ++r +L+++lgL+ rqVk+WFqNrR+++k
  XP_022996123.1  91 KKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMK 146
                     688899***********************************************998 PP
2START154.87.2e-492935183206
                     HHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS...............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EE CS
           START   3 aeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv..............dsgealrasgvvdmvlallveellddkeqWdetla....ka 79 
                     a + ++elvk+  ++ep+W + s  e g+evl  +e ++               +++ea r+s+vv+m++ +lv  +ld + +W e ++    ka
  XP_022996123.1 293 AISSMAELVKMCRLTEPLWIRNS--ESGKEVLNVEEHARMfpwplnlkqhlmneFRTEATRDSAVVIMNSITLVDAFLDAN-KWMELFPslvaKA 384
                     67899******************..99*****999998889****************************************.************* PP

                     EEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEE CS
           START  80 etlevissg......galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtw 166
                     +t++ iss       g l lm++elqalspl p R+  f+R+++q   +g+w+ivd  +ds  +   ++s+ R +++pSg++i++++ng+s+vtw
  XP_022996123.1 385 KTVQIISSSvsghasGSLRLMYSELQALSPLIPtREAHFLRCCQQnADEGSWAIVDFPIDSFHDSL-QHSFPRYRRRPSGCIIQDMPNGYSRVTW 478
                     *********************************************9999*************9987.9*************************** PP

                     EE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 167 vehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     veh++ +++ +h++++ +v+sg+a+ga +w+a lqrqce+
  XP_022996123.1 479 VEHAEIEEKPIHQIFNNFVHSGMAFGAHRWLAILQRQCER 518
                     **************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 811 aa     Download sequence    
MYGDCQVMSS NMGANMASSE SLFSSPIQNP NFNFISNFHH FPSVVPKEEN GMITRGKEDI  60
ESGSGSEQLV EENPGIEMES NDNIILQNQK KKRYHRHTAR QIQEMEALFK ECPHPDDKQR  120
LKLSQELGLK PRQVKFWFQN RRTQMKAQQD RSDNVILRSE NDTLKNENYK LQTALRNIIC  180
PSCGGQGILG EPSLDEQQLR LENARLREQL EQVCSFTSRY TGRSLQVMSS TAPPLMQPSL  240
DLDMNIYSRQ YTEAMASSSE MMPLGSMLPP NAAHFPEGGL LIEEEKTLAM DLAISSMAEL  300
VKMCRLTEPL WIRNSESGKE VLNVEEHARM FPWPLNLKQH LMNEFRTEAT RDSAVVIMNS  360
ITLVDAFLDA NKWMELFPSL VAKAKTVQII SSSVSGHASG SLRLMYSELQ ALSPLIPTRE  420
AHFLRCCQQN ADEGSWAIVD FPIDSFHDSL QHSFPRYRRR PSGCIIQDMP NGYSRVTWVE  480
HAEIEEKPIH QIFNNFVHSG MAFGAHRWLA ILQRQCERIA SLMARNISDL GVIPSPEARQ  540
NLMKLAQRMT RTFSLNISTS GGQSWTALSD SPDDTVRITT RKIVEPGQPN GVILSAVSTT  600
WLPYPHYRVF DLLRDERQRS QLEVLSNGNS LHEVAHIANG SHPGNCISLL RINVASNFSQ  660
HVELMLQESC TDQSGSLVVF AMIDVDSIQL AMSGEDSSSI PLLPIGFSIV PVVGSTADGR  720
LASSPPKDGA TNAAVVNSGC LLTVGLQVLA STIPSAKLNL SSVTAINNQL CNTLHQINAA  780
LGCSPTQLEN ANTAVDQNTA LPLPTQPPPK Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein