PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022996108.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 162aa    MW: 18197.3 Da    PI: 8.5975
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022996108.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.93.7e-054365123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_022996108.1 43 YSCNFCRREFKSAQALGGHMNVH 65
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MDGGKYRSMS NGKVVKNEEQ QWGFGKQETF SSDQFLQWPA RKYSCNFCRR EFKSAQALGG  60
HMNVHRRDRG RLRYWSSWMH NNSYPTPSFC LPPPPPSCFS FRPNIENSSL TCIDGSGGKP  120
SSGPQGDEDA DADVDGVKKK RKKGSVNLVG CSSEDLDLEL HL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1139143KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42410.18e-20C2H2 family protein