PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022996032.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ERF | ||||||||
Protein Properties | Length: 242aa MW: 26361.8 Da PI: 8.4778 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.6 | 9.8e-21 | 93 | 143 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp+++g +r++lg+++ta eAaka+++a+ k++g XP_022996032.1 93 HYRGVRRRP-WGKFAAEIRDPNKRG--ARVWLGTYDTAIEAAKAYDRAAFKMRG 143 69*******.**********96655..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MASGDDASTL DFIRQHLLSD FNSIEAFASN LDFINNNGLT PQIPAAPSKI GHRRPSLNVM 60 IPPKTHSVQS PAAATATVTT SSDVKSDVGL SQHYRGVRRR PWGKFAAEIR DPNKRGARVW 120 LGTYDTAIEA AKAYDRAAFK MRGSKAILNF PLEAGKEADE PPSTAAVGRK RRRESEVGEM 180 ENKFVKKEEE SSETNEIGVP AAICPLTPSC WAPVWDNDGK GIFSVPPLSP HLLMGYPQCT 240 VT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 169 | 173 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51190.1 | 5e-63 | ERF family protein |