PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022995928.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | G2-like | ||||||||
Protein Properties | Length: 538aa MW: 60736.6 Da PI: 4.9148 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 87.3 | 1.5e-27 | 303 | 356 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_022995928.1 303 KTKVDWSPELHRKFIRAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 356 6799*****************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 41.3 | 3.6e-13 | 306 | 355 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_022995928.1 306 VDWSPELHRKFIRAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 355 57***********************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 538 aa Download sequence |
MVCTADDLQE WKDFPKGLRV LLLDRDSRSA TEIRAKLEEM EHVVYYCNDE KEALSAIMNT 60 PENFHIAILE MCEGNYDESF KLLGSSKDLP IIMTSDVYCL STMMKCIALG AVEFLLKPLS 120 EDKLRNIWQH VLHKAFSSTP KPEVDSAASL MQLQLESEDN TGVLEDTEVL SWIQDVVWEQ 180 EQPEGSVIYQ LNQGSSLQGC WESENQMNRP METDCSDKDV RSNFVETASH DLVCEDTLQE 240 GQPRLSGEVM LEGDRNFVVG LNAESDLYLP LQNKSGVKSG PSAAEHSIQG SDVNPSASSK 300 ARKTKVDWSP ELHRKFIRAV EQLGIDRAIP SKILELMKVE GLTRHNVASH LQKYRMQRKH 360 VMQREENLTR YSMQTNHSPP IMAYPSYPYC GISMSTVYRT WTQTNGHPAN VNMRGPPDYR 420 HWPQPGTQPW NSYAGMQADA WGCPVMLPSR APYFSYPQQI SASHNVYTAN KGYGTPQISF 480 DLQPNEELID EIVNEAKRKP WSPLPLGLKP PSAEILVEEL PKQGISTLTP QINAFNPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18020.3 | 2e-88 | ARR-B family protein |