PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022995706.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 843aa MW: 92170.1 Da PI: 5.8071 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.4 | 2.5e-18 | 26 | 83 | 4 | 57 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++t+eq+e+Le++++++++ps +r++L +++ +++ +q+kvWFqNrR +ek+ XP_022995706.1 26 YVRYTSEQVEALERVYAECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 83 5789****************************************************97 PP | |||||||
2 | START | 155 | 6.1e-49 | 164 | 372 | 2 | 205 |
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 +aee+++e+++ka+ ++ Wv+++ +++g++++ +f+ s+++ g a+ra+g+v ++a +e+l+d++ W +++++ e+ g g+++l XP_022995706.1 164 IAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCGGVAARACGLVSLEPA-KIAEILKDRPSWFRDCRSLEVFTMFPAGngGTIELV 257 7899******************************************************.7777777777***********999999999****** PP EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS START 95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185 +++ +a+++l+p Rdf+++Ry+ +l+ g++v++++S++ p+ +++vRae+lpSg+li+p+++g+s +++v+h +l+++ ++++lr+l+ XP_022995706.1 258 YTQVYAPTTLAPaRDFWTLRYTITLENGSLVVCERSLSGSGAGPSpaaAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWNVPEVLRPLY 352 **************************************99888888999********************************************** PP HHHHHHHHHHHHHHTXXXXX CS START 186 ksglaegaktwvatlqrqce 205 +s+ + +++++ a+l++ ++ XP_022995706.1 353 ESSKVVAQNMTIAALRYVRQ 372 ***************98765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 843 aa Download sequence |
MAMAIAHHRE SSSGSLTRHL DSTGKYVRYT SEQVEALERV YAECPKPSSL RRQQLIRECP 60 ILSNIEPKQI KVWFQNRRCR EKQRKEASRL QTVNRKLNAM NKLLMEENDR LQKQVSQLVC 120 ENGFMRQQLQ TVPAATTDAS CDSVVTTPQP SKTDANNPAG LLSIAEETLA EFLSKATGTA 180 VDWVQMPGMK PGPDSVGIFA ISQSCGGVAA RACGLVSLEP AKIAEILKDR PSWFRDCRSL 240 EVFTMFPAGN GGTIELVYTQ VYAPTTLAPA RDFWTLRYTI TLENGSLVVC ERSLSGSGAG 300 PSPAAAAQFV RAEMLPSGYL IRPCEGGGSI IHIVDHLNLE AWNVPEVLRP LYESSKVVAQ 360 NMTIAALRYV RQIAQETSGE VVYGLGRQPA VLRTFSQRLS RGFNDLVNGF NDNGWSLINC 420 EGAEDVVLAV NSTKNFGTTS NPANSLTYPG GVLCAKASML LQNVPPAVLV RFLREHRSEW 480 ADFNIDAYSA ATLKANSYAY PGMRPTRFTG SQIIMPLGHT IEHEELLEVI RLEGHPMVQE 540 DAFVSRDIHL LQICSGINEN AVGACSELIF APIDEMFPDD APLLPSGFRI IPLDSRTSDA 600 QGALTTQRTL DLTSSLEVGS GTSNIAGDAS SSQSPRSVLT IAFQFPFESS MQDNVMNMAQ 660 QYVRSVISSV QRVAMAISPS GGSPSLGPKL SPGSPEALTL AHWICKSYSL QLGTELISSY 720 SLESDSLLKN LWNHQDAILC CSLKSLPVFM FANQAGLDML ETTLVALQDI TLDKIFDEAG 780 RKALCSDFPK LMQQGFAYLP GGICASTMGR HVSYEQAIAW KVLEADETTV HCLAFSFINW 840 SFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60690.1 | 0.0 | HD-ZIP family protein |