PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022995610.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 261aa    MW: 29403 Da    PI: 6.7759
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022995610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.43.4e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+++++++G g+W++ ++  g+ R++k+c++rw +yl
   XP_022995610.1 14 KGPWTPEEDQILINYINLYGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding54.13.7e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T++E+e +++++++lG++ W++Ia++++ gRt++++k+ w+++l
   XP_022995610.1  67 RGNFTQQEEETIIKLHQMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MVRSPCCEKM GLKKGPWTPE EDQILINYIN LYGHGNWRAL PKQAGLLRCG KSCRLRWTNY  60
LRPDIKRGNF TQQEEETIIK LHQMLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRITQNY  120
ATPQLRNYTA VNRQSYGGDI PAAAGEESAA QSYKFTTFHS MQSCGSASSP PHCSSESSSV  180
ATAENGELST NNLPEADDSF WMEVLANDQI AMVGSQQGFV GEIYQGQFGN LTMEQPVNET  240
MDFWYNIFAR GGELSELKEI L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.12e-81MYB family protein