PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022995433.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARF

Protein Properties

Length: 694aa MW: 77394.9 Da PI: 6.6443

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022995433.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.4	6.5e-24	129	230	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+kvlt sd++++g +++ +k+a+e+ + + +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD++vF + + XP_022995433.1 129 FCKVLTASDTSTHGGFSVLRKHANEClppldmtQ--ATPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLTAGDSFVFL--RGD 219 99**************************9543..445568********************************************..347 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 +++l+v+v+r+ XP_022995433.1 220 NGQLRVGVRRR 230 8889***97 PP
2	Auxin_resp	97.1	2.6e-32	255	333	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 a+ha++t++ F v+Y+Pr+ +F+++++k+++a++ k+s+GmRf m+fe+eds+err+sGt++gv d++p +W nS WrsL XP_022995433.1 255 ASHAVTTQTRFVVYYKPRT--CQFIISLNKYLEAVNYKFSLGMRFNMSFEGEDSPERRFSGTIIGVGDISP-HWANSSWRSL 333 689*************6..89******************************************99.*******9 PP

Sequence ? help Back to Top
Protein Sequence Length: 694 aa Download sequence
MTFHGGDSYT HSCVSAQGRG RDDLYMELWR ACAGPLVDIP RVDEKVFYFP QGHMEQLEAS 60 TNLELNKRIP LFNLSSKILC RVIHIEPLAD HESDEVYAQI NLLPESNQSE PRSLDPCPPE 120 PVKPVVHSFC KVLTASDTST HGGFSVLRKH ANECLPPLDM TQATPTQDLV AKDLHGYEWR 180 FKHIFRGQPR RHLLTTGWST FVTSKRLTAG DSFVFLRGDN GQLRVGVRRR AQQQSSMPPS 240 VISSQSMHLG VLATASHAVT TQTRFVVYYK PRTCQFIISL NKYLEAVNYK FSLGMRFNMS 300 FEGEDSPERR FSGTIIGVGD ISPHWANSSW RSLRVQWDEQ TSILRPDRVS PWDIEPLTSS 360 AVSSLSQHVS KNKRPRQSTE TPAHDGADLT KSAHWDSGLA QSHDGKQCGN ATESRKGENN 420 ELCHHSEIDT ISNSTCVSRT QTDGTWLFST QSNGYKDPVN DIAQDYKTVP VCGWSILSGP 480 SKVSDDQILD PTENGRKGET VASCRLFGID LNHLAKLPAE KASSQPSSMS SDTDGRISTL 540 SVAQSDSKSG NREASIQRKL QASLKETQSS STNTRSRTKV HMHGMAVGRA VDLTILEGYD 600 QLIDELEKMF DVKGQLSARD KWEIVYTDDE GDMMLVGDDP WEEFCNMVRR IFICSREQVK 660 KMSSGSKQLA SIEVEGAVAP KECDGMFGIM HIIE

Sequence ? help Back to Top

Protein Sequence Length: 694 aa Download sequence

MTFHGGDSYT HSCVSAQGRG RDDLYMELWR ACAGPLVDIP RVDEKVFYFP QGHMEQLEAS  60
TNLELNKRIP LFNLSSKILC RVIHIEPLAD HESDEVYAQI NLLPESNQSE PRSLDPCPPE  120
PVKPVVHSFC KVLTASDTST HGGFSVLRKH ANECLPPLDM TQATPTQDLV AKDLHGYEWR  180
FKHIFRGQPR RHLLTTGWST FVTSKRLTAG DSFVFLRGDN GQLRVGVRRR AQQQSSMPPS  240
VISSQSMHLG VLATASHAVT TQTRFVVYYK PRTCQFIISL NKYLEAVNYK FSLGMRFNMS  300
FEGEDSPERR FSGTIIGVGD ISPHWANSSW RSLRVQWDEQ TSILRPDRVS PWDIEPLTSS  360
AVSSLSQHVS KNKRPRQSTE TPAHDGADLT KSAHWDSGLA QSHDGKQCGN ATESRKGENN  420
ELCHHSEIDT ISNSTCVSRT QTDGTWLFST QSNGYKDPVN DIAQDYKTVP VCGWSILSGP  480
SKVSDDQILD PTENGRKGET VASCRLFGID LNHLAKLPAE KASSQPSSMS SDTDGRISTL  540
SVAQSDSKSG NREASIQRKL QASLKETQSS STNTRSRTKV HMHGMAVGRA VDLTILEGYD  600
QLIDELEKMF DVKGQLSARD KWEIVYTDDE GDMMLVGDDP WEEFCNMVRR IFICSREQVK  660
KMSSGSKQLA SIEVEGAVAP KECDGMFGIM HIIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.1	0.0	ARF family protein