PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022995192.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 229aa MW: 25506.6 Da PI: 8.5091 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.8 | 5.8e-14 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l + + +G +W++++ + g+ R +k+c++rw +yl XP_022995192.1 16 KGLWSPEEDQRLRNFILNHGHACWSSVPLKAGLERNGKSCRLRWINYL 63 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.4 | 1e-15 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++++E++ ++ ++++lG++ W+ Ia++++ gRt++++k+ w++yl XP_022995192.1 69 RGTFSQQEQDTIISLHHMLGNR-WSQIAQHLP-GRTDNEVKNLWHSYL 114 899*******************.*********.************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MGRETASHKA KLKHRKGLWS PEEDQRLRNF ILNHGHACWS SVPLKAGLER NGKSCRLRWI 60 NYLRPGLKRG TFSQQEQDTI ISLHHMLGNR WSQIAQHLPG RTDNEVKNLW HSYLKKKVEK 120 QGCSAHSTAS TTSESADSSI TAQSMDSPKP KLLFAEWLAG AGTGFGQSFS SVHEGTGDLN 180 GTHLEGGGLG SEIQNNGFMM DSHIKFEDQI CNGNYDCVDQ LLHFGNGFM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25560.1 | 2e-57 | MYB family protein |