PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022995123.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family AP2
Protein Properties Length: 270aa    MW: 29452.6 Da    PI: 6.7906
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022995123.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.44.9e-1052109355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtae........eAakaaiaarkkleg 55 
                     y+GV+++++ grW A+I  +     +k  +lg+f t+e        +Aa+a++ a+ k++g
  XP_022995123.1  52 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEqeqeqeqeQAAEAYDIAAIKFRG 109
                     9***************988532...5**********77999999999**********9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MAISTCIANL PCTKLISNYE KEVEEMKHMT RQEFVAAITR KSSGFSWGAS MYRGVTRHHQ  60
HGRWQARIGR VAGNKDLYLG TFSTEEQEQE QEQEQAAEAY DIAAIKFRGL NAVTNFDMCR  120
YDVKSILDSN SVPIGGGAAK RLKEAQAMEA SRKREEMMIA LGASSSSSNS SHHRLLQSPN  180
FTQPLLSLQN KDPAWFHHST YSHYGNNTPF YGGGGGDSSG GYLGSALGMG CTSGDEYALV  240
KVDYDMPNSD GGGYGRWSGD SVLGSNNGGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51190.11e-80AP2 family protein