PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022995117.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 299aa    MW: 32903.9 Da    PI: 6.3579
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022995117.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.34.1e-142370148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd++l  +    G g+W+ +ar  g+ R++k+c++rw +yl
   XP_022995117.1 23 KGLWSPEEDDKLRTYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYL 70
                     678*******************************************97 PP
2Myb_DNA-binding49.41e-1576119146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++++E++l ++++ +lG++ W+ Ia++++ gRt++++k++w++
   XP_022995117.1  76 RGAFSPQEEDLVIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 119
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MRKPDAAAPG GGCGGPAPTK LRKGLWSPEE DDKLRTYMLN NGQGCWSDVA RNAGLQRCGK  60
SCRLRWINYL RPDLKRGAFS PQEEDLVIHL HSLLGNRWSQ IAARLPGRTD NEIKNFWNST  120
IKKRLKNLSS TPSPNTSSDS PSGDSKSNLF PTFLLGQDQQ QQQNSIDFPI FAADPSPSVI  180
ALDPFPLLST THGIPFFPSA APTFTGGVEM GFYREDDSFF NLPLLQSVNT TTTTATATAA  240
TGGETKHSNY LINNNPKMES MNGGVGANFI HEEFSMGEWE LEDLMKDVPS FPCLNFQVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.12e-67MYB family protein