PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022995107.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 348aa MW: 38776.9 Da PI: 7.247

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022995107.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.1e-05	183	202	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ XP_022995107.1 183 FSCPLCFKTFNRYNNMQMHM 202 89*****************9 PP
2	zf-C2H2	15.4	5.1e-05	267	289	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk F + + ++H +++ XP_022995107.1 267 FTCRKCGKAFAVRGDWRTHEKNC 289 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MADPYSINAS SFSLYHYFSS SSSSPPSNSN PFSPYDLFSF SYSNDDNDNN TLKNPSSSPR 60 VLPLLSLSPV RHDHQDHLFS RDNNKNLCSP CEEDDDETVT VALHLGLPSA PSSSSSSDLI 120 LRLSSTEISD KLEGQLEEAV PVVVPNYYSV SSSSSSSTTG GGLNKGQYWI PTPAQILIGP 180 TQFSCPLCFK TFNRYNNMQM HMWGHGSQYR KGPQSLRGTQ PTAMLRLPCY CCAPGCRNNI 240 DHPRSKPLKD FRTLQTHYKR KHGIKPFTCR KCGKAFAVRG DWRTHEKNCG KLWHCTCGSD 300 FKHKRSLKDH IKAFGHGHAA YGIDSFDEDD EPASEIEHDN DLSHSNGD

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MADPYSINAS SFSLYHYFSS SSSSPPSNSN PFSPYDLFSF SYSNDDNDNN TLKNPSSSPR  60
VLPLLSLSPV RHDHQDHLFS RDNNKNLCSP CEEDDDETVT VALHLGLPSA PSSSSSSDLI  120
LRLSSTEISD KLEGQLEEAV PVVVPNYYSV SSSSSSSTTG GGLNKGQYWI PTPAQILIGP  180
TQFSCPLCFK TFNRYNNMQM HMWGHGSQYR KGPQSLRGTQ PTAMLRLPCY CCAPGCRNNI  240
DHPRSKPLKD FRTLQTHYKR KHGIKPFTCR KCGKAFAVRG DWRTHEKNCG KLWHCTCGSD  300
FKHKRSLKDH IKAFGHGHAA YGIDSFDEDD EPASEIEHDN DLSHSNGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-126	C2H2 family protein