PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022994806.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family TCP
Protein Properties Length: 448aa    MW: 48620.6 Da    PI: 6.887
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022994806.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP118.39.7e-37932452134
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................ssssasec.eaesss 79 
                      g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LGf ++sk++eWL+++a  ai el+++                +++s+ e+  +++ +
  XP_022994806.1  93 SGGKDRHSKVWTSKGLRDRRVRLSVPTAIQFYDLQDRLGFEQPSKAVEWLIEAAADAIAELPSLhgafsdekmgsdgtdqGFDSP-EMeLDDDTK 186
                     689**************************************************************99999999888666544443.234455555 PP

             TCP  80 ssasnsssgkaaksaakskksqksaasalnlak....esrakarararertrekmrikn 134
                     + ++n++   + + +a+s+ s++s+ s l+l++      rakar rarert++++ +++
  XP_022994806.1 187 KHQQNQRRMLSLARSACSSTSETSKGSGLSLSRseilVNRAKARDRARERTAKEKEKEQ 245
                     5555556666666666777777777777777775455778*********9988877664 PP
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    
MEVVEIQEQP CRFSRIGNRG NESNKLGQKG IVHSPDDEEI KEFSKRVAVV ASASVSATAG  60
GVEPGDCGGG GGGVNRLRGW HHSSRIIRVA RASGGKDRHS KVWTSKGLRD RRVRLSVPTA  120
IQFYDLQDRL GFEQPSKAVE WLIEAAADAI AELPSLHGAF SDEKMGSDGT DQGFDSPEME  180
LDDDTKKHQQ NQRRMLSLAR SACSSTSETS KGSGLSLSRS EILVNRAKAR DRARERTAKE  240
KEKEQESIPN NQSFTELLTG GGATTNRTSS APENTAVEPN LYDKATAMDY LTSSGIIGQE  300
PSSSSSSRPG HNQSAGFSGQ IFLGNPHQLP MSVPQFNVSA GENTQQDRLQ HFSFVPDNLN  360
DYNLNFTISA GLAGCNRGTL QSNISPSLLP YLQRFPHDGS NVPFFIGAPS PATTPVQLEN  420
HQHLFDGSWQ LCYADGTHHS DQKGKGKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.11e-51TCP family protein