PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022994650.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 291aa MW: 32791.4 Da PI: 4.9292

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022994650.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.8	4.4e-19	100	153	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t++q++ Le+ Fe ++++ e++ +LAk l+L+ rqV +WFqNrRa++k XP_022994650.1 100 KKRRLTSDQVRFLEKSFEIDNKLEPERKVQLAKDLELQPRQVAIWFQNRRARWK 153 56789************************************************9 PP
2	HD-ZIP_I/II	127.3	6.6e-41	99	189	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+++qv++LE+sFe ++kLeperKv+la++L+lqprqva+WFqnrRAR+ktkqlEkdyeaL+++y +lk e e+L ke+++L++++ XP_022994650.1 99 EKKRRLTSDQVRFLEKSFEIDNKLEPERKVQLAKDLELQPRQVAIWFQNRRARWKTKQLEKDYEALQSSYGSLKVEYEKLLKEKDSLKAKI 189 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MAVRRVYGGG DDGGSISGVS SNHTVFPQNR KGSSVSEPLN ALFVSGSSSS TSPSMLGSKS 60 TVSFKDIHGR NGSTRPFFYS FDTEDKGNED LDDYFHHPEK KRRLTSDQVR FLEKSFEIDN 120 KLEPERKVQL AKDLELQPRQ VAIWFQNRRA RWKTKQLEKD YEALQSSYGS LKVEYEKLLK 180 EKDSLKAKIL VLTDKLLLKA KEKGSSVVSE VDKSSDIFDS DSPLVEPRDS SYIFDPDQSD 240 LSQDEDDNTG KNLLPTYVFP KLEDVNYSDP PASACSFVFP IDEDGALWSW S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	148	156	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	1e-36	HD-ZIP family protein