PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022994649.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 293aa    MW: 33003.7 Da    PI: 4.9292
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022994649.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.84.5e-19102155356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k++++t++q++ Le+ Fe ++++  e++ +LAk l+L+ rqV +WFqNrRa++k
  XP_022994649.1 102 KKRRLTSDQVRFLEKSFEIDNKLEPERKVQLAKDLELQPRQVAIWFQNRRARWK 155
                     56789************************************************9 PP
2HD-ZIP_I/II127.36.7e-41101191191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     ekkrrl+++qv++LE+sFe ++kLeperKv+la++L+lqprqva+WFqnrRAR+ktkqlEkdyeaL+++y +lk e e+L ke+++L++++
  XP_022994649.1 101 EKKRRLTSDQVRFLEKSFEIDNKLEPERKVQLAKDLELQPRQVAIWFQNRRARWKTKQLEKDYEALQSSYGSLKVEYEKLLKEKDSLKAKI 191
                     69**************************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MAVRRVYGGG DDGGSISGVS SNHTVFPQNR KGSSVSEPLN ALFVSGSSSS TSPSMLVIGS  60
KSTVSFKDIH GRNGSTRPFF YSFDTEDKGN EDLDDYFHHP EKKRRLTSDQ VRFLEKSFEI  120
DNKLEPERKV QLAKDLELQP RQVAIWFQNR RARWKTKQLE KDYEALQSSY GSLKVEYEKL  180
LKEKDSLKAK ILVLTDKLLL KAKEKGSSVV SEVDKSSDIF DSDSPLVEPR DSSYIFDPDQ  240
SDLSQDEDDN TGKNLLPTYV FPKLEDVNYS DPPASACSFV FPIDEDGALW SWS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1150158RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.12e-37HD-ZIP family protein