PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022994644.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 328aa MW: 36825.4 Da PI: 7.2757

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022994644.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.3	1.3e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++++++G g+W+++++ g+ R++k+c++rw +yl XP_022994644.1 14 KGLWSPEEDEKLFNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	46	1.2e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++ +++ lG++ W+ Ia+ ++ gRt++++k++w++ XP_022994644.1 67 RGMFSQQEEDLIISLHEVLGNR-WAQIAAQLP-GRTDNEIKNFWNS 110 788*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MGRHSCCLKQ KLRKGLWSPE EDEKLFNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGMF SQQEEDLIIS LHEVLGNRWA QIAAQLPGRT DNEIKNFWNS SLKKKLMKQG 120 IDPNTHKPLI KEIKEKKIFE DKEFTQIPPV PGLSGGLSAI PTQNPAFLIG GAEYYDGGMT 180 APPHRDHFLN KQALDSLCFF EFQTGLDSNF GFSSVPSLTN SDHGSLSGTE FSDNSGGFYM 240 NNNNNNNRVD NSTFCSWENE NKSESFFQIH VDSHSNVVKS EELKTVTGSS VVDGQLIQSR 300 SSVDFSSYPL TSLTQAIVGG NFDVFHHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	5e-81	MYB family protein