PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022994434.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 303aa MW: 34300.7 Da PI: 6.4172

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022994434.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.5	2.7e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lvd++++ G g+W+ ++ g+ R++k+c++rw +yl XP_022994434.1 14 KGPWTPEEDYKLVDYIQKNGHGNWRNLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	50.1	6.5e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ eE+e ++++++ lG++ W++Ia +++ Rt++++k++w+++ XP_022994434.1 67 RGKFSFEEEEAIIQLHRVLGNK-WSAIATRLP-ERTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MGRTPCCDST GLKKGPWTPE EDYKLVDYIQ KNGHGNWRNL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SFEEEEAIIQ LHRVLGNKWS AIATRLPERT DNEIKNYWNT HIRKRLLRMG 120 MDPVTHSPCL DLLDLSAILR STLYSSSQMK VSSLLGVQPL VNPELLKLAA SLMSSEHKSP 180 SFSPQNSSLT IQFPHEQQLV EPTGSEFNDE WLSGLILPSC LNLDANFELL GYDYHGLDHQ 240 ELAPTLSSVV GKNKNLCSPY SSSPTQMNSN STNFTSAAED EKESYCSQIL NFEIHDIFDE 300 AFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-102	MYB family protein