PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022994244.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 563aa MW: 62162.2 Da PI: 9.4507

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022994244.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	54.3	2.3e-17	272	321	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+ E+rRR++iN++f++Lre++P + ++K +Ka+ L ++eYI+ Lq XP_022994244.1 272 RSKHSVTEQRRRSKINDRFQKLREIIPRS----DQKRDKASFLLGVIEYIQFLQ 321 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 563 aa Download sequence
MELPQPPRLR TEGRKPTHEF VSLNGHSTVH QQDHPSQSFQ GGYLKTHDFL RPLERVGKSC 60 AKEEKTISVS TAERAEPPLA TAGHNSSVEC VLPGGIGTYN ISHISYFNQR GVPKPEGSVF 120 SAAQASSTDK SDDNSRCSSL SGSGFTLWEE SAVKKGKTRK ENLGEKAGLR AEPPAKIVQW 180 TVSTERPTQS SSSNHRNSFN SLASSQPPSG QQNRSFGEML KSVVKVSSEE EELDDGKAFV 240 IKKESSPSTA YKGELRMNIG GKCSDQKANT PRSKHSVTEQ RRRSKINDRF QKLREIIPRS 300 DQKRDKASFL LGVIEYIQFL QEKVREYESS PPQGWYREPA KLIPGRNNCN PAQCYIDQSQ 360 VAKRGPVFLF SGSNEKSMSH SPAFPRCSHN PVESEVSTST AFREADHHPG TANKTTSYQM 420 LQPRNYTPVI REGERTDLQS QMGYNADNKP CEMRSCNTDI AAGGNNLKEP EQSIEGGRIN 480 ISSAYSQGLL KILTQALQRS GVDMSQASIG VQIELGKRIN YRETVTRPAI VDDSSRPSER 540 GILGTRGAAA EDLEQAISKK QKT

Sequence ? help Back to Top

Protein Sequence Length: 563 aa Download sequence

MELPQPPRLR TEGRKPTHEF VSLNGHSTVH QQDHPSQSFQ GGYLKTHDFL RPLERVGKSC  60
AKEEKTISVS TAERAEPPLA TAGHNSSVEC VLPGGIGTYN ISHISYFNQR GVPKPEGSVF  120
SAAQASSTDK SDDNSRCSSL SGSGFTLWEE SAVKKGKTRK ENLGEKAGLR AEPPAKIVQW  180
TVSTERPTQS SSSNHRNSFN SLASSQPPSG QQNRSFGEML KSVVKVSSEE EELDDGKAFV  240
IKKESSPSTA YKGELRMNIG GKCSDQKANT PRSKHSVTEQ RRRSKINDRF QKLREIIPRS  300
DQKRDKASFL LGVIEYIQFL QEKVREYESS PPQGWYREPA KLIPGRNNCN PAQCYIDQSQ  360
VAKRGPVFLF SGSNEKSMSH SPAFPRCSHN PVESEVSTST AFREADHHPG TANKTTSYQM  420
LQPRNYTPVI REGERTDLQS QMGYNADNKP CEMRSCNTDI AAGGNNLKEP EQSIEGGRIN  480
ISSAYSQGLL KILTQALQRS GVDMSQASIG VQIELGKRIN YRETVTRPAI VDDSSRPSER  540
GILGTRGAAA EDLEQAISKK QKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	4e-96	bHLH family protein