PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022994148.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 260aa MW: 29192.8 Da PI: 9.3126

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022994148.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	96.7	9.6e-31	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gkl+e+s XP_022994148.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLFEFS 58 79***********************************************8 PP
2	K-box	93	5.1e-31	93	174	19	100
K-box 19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ +Lk+ +e +q++qR+llGedL++L+ keL+qLe+qLe+sl++iRs+K++ l++q+ elq+ke++l e+n++Lrkklee XP_022994148.1 93 DDYLNLKATVEFMQQSQRNLLGEDLGPLNAKELEQLEHQLETSLERIRSTKTQTLMDQLAELQRKEHMLVEDNRSLRKKLEE 174 6899***************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLFEFSGG 60 SSMTKTLEKY RRCSYDIRDG ARHLNNNGPQ SFDDYLNLKA TVEFMQQSQR NLLGEDLGPL 120 NAKELEQLEH QLETSLERIR STKTQTLMDQ LAELQRKEHM LVEDNRSLRK KLEESSAQVA 180 AASAAWGWEG GAGGHSMDYS SRIASQSDAF FYPITQPIPT LQMGYNSVGS VGLSNNNNNN 240 NRNVGAPPQN GNGFQVGWML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15800.1	2e-79	MIKC_MADS family protein