PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022994147.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 261aa MW: 29320.9 Da PI: 9.3126

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022994147.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	96.7	9.7e-31	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gkl+e+s XP_022994147.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLFEFS 58 79***********************************************8 PP
2	K-box	92.6	6.8e-31	91	175	16	100
K-box 16 slqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ ++ +Lk+ +e +q++qR+llGedL++L+ keL+qLe+qLe+sl++iRs+K++ l++q+ elq+ke++l e+n++Lrkklee XP_022994147.1 91 QSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNAKELEQLEHQLETSLERIRSTKTQTLMDQLAELQRKEHMLVEDNRSLRKKLEE 175 5557899***************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLFEFSGG 60 SSMTKTLEKY RRCSYDIRDG ARHLNNNGQP QSFDDYLNLK ATVEFMQQSQ RNLLGEDLGP 120 LNAKELEQLE HQLETSLERI RSTKTQTLMD QLAELQRKEH MLVEDNRSLR KKLEESSAQV 180 AAASAAWGWE GGAGGHSMDY SSRIASQSDA FFYPITQPIP TLQMGYNSVG SVGLSNNNNN 240 NNRNVGAPPQ NGNGFQVGWM L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15800.1	1e-79	MIKC_MADS family protein