PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022994095.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ARF | ||||||||
Protein Properties | Length: 681aa MW: 75497.7 Da PI: 6.334 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 71 | 1.6e-22 | 130 | 230 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++ +++a+++ +++ ++l+ +d++g++W +++i+r++++r++lt+GW+ Fv++++L +gD ++F + + XP_022994095.1 130 FCKTLTASDTSTHGGFSVLRRHADDClppldmsQQP--PWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFL--RGE 220 99****************************964333..4459************************************************..449 PP EE..EEEEE- CS B3 89 efelvvkvfr 98 ++el+v+v+r XP_022994095.1 221 NGELRVGVRR 230 999*****97 PP | |||||||
2 | Auxin_resp | 101.5 | 1.1e-33 | 256 | 338 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F+v+Y+Pr+s+s F v+++k+++a ++k+svGmRfkm+fe+e+++er++sGt+vg+ d + W nS WrsLk XP_022994095.1 256 ASHAVATGTLFSVFYKPRTSRSTFLVSLNKYLEAQSHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGWANSDWRSLK 338 789******************************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 681 aa Download sequence |
MSFSAVSNLP SGGPHSVSGS SSDALYRELW HACAGPLVTL PRQDERVYYF PQGHMEQLEA 60 SMNQGLEQQM PSFNLASKIL CKVVNVVLRA EPDTDEVYAQ ITLLPESNQS EVTTPDPALP 120 EPTRCNVHSF CKTLTASDTS THGGFSVLRR HADDCLPPLD MSQQPPWQEL VATDLHGNQW 180 HFRHIFRGQP RRHLLTTGWS VFVSSKKLVA GDAFIFLRGE NGELRVGVRR LMRQLNNMPS 240 SVISSHSMHL GVLATASHAV ATGTLFSVFY KPRTSRSTFL VSLNKYLEAQ SHKLSVGMRF 300 KMRFEGEEVP ERSFSGTIVG LGDNASPGWA NSDWRSLKVQ WDEPSSILRP DRVSAWELEP 360 LVASNPLSSQ PTQRNKRPRP TVLPSPTADA AVLGGWKPTV ESSAFSFTEP PQRGRDVYSS 420 PKFSTAASNS LGFNGNSSLG AVSSNNYWSN TNRVENIIDT SSHGANREPI EKKQNTRNGC 480 RLFGIQLLGN SDVGEASPDT TPKMVSEDRS VPPVDAEFDQ NSERSNVHRL DIPSVSCDAD 540 KSCLISPLES QSRQIRSCTK VHMQGIAVGR AVDLTRFNQY DDLLRKLEDM FDIEGELCGS 600 VKKWQVVYTD DEDDMMMVGD DPWNEFVSMV RKIFIYTTEE VKRLSPKIKL PLGGETKLSK 660 PDSDMTANHT EDQSSIVGSD C |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 376 | 380 | KRPRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59750.2 | 0.0 | ARF family protein |