PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022994065.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1372aa MW: 150753 Da PI: 7.4199

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022994065.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.2	1.7e-07	949	989	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT E +++av +G++ ++ I+ ++g ++ qck ++ XP_022994065.1 949 YWTDGEKSHFIEAVSVYGKN-FSMISTHVG-SKSTDQCKVFFS 989 5***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1372 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSSSHGSR EFSRWGSGDF RRPPGHGRQG 60 GWHVFSDEYG HGYGPSMSFN NKMLENVSSR PSVSHGDGKY PRNARESRSF SQRDWKGHSW 120 TTSNGSTNSG GRLQHDLNYD QRDKVKGQHD KVDDVNGLGT NQRRDQEYSV SSSGWKPLKW 180 TRSGALSSRT STSGHSSSTR IAGALDSNEA KSETVLKNAL QNLSPSADSA ECAMSSLPYD 240 EATVRKKPRL GWGEGLAKYE KKKVEVPDAT AFTNVHAEST HSLNSSLIEK GPRCSGFSDR 300 TSPAPHSFVI SGSSPGGDEK SSGKASIDND VSDLHGSPGS GFQNQYEGTS SVEKLNDFSI 360 AKLCAPLIPL LQSSDSISED SSFMSSTALS KLLLYKKEIS KVLETTESEI DLLENELKGL 420 ISDSKGYFSF PLASRSFLEG DKYFEEKNDV TNTVATMPVV TSANTISKPM EHSTSDLEEV 480 PADAKGMDRS GRLDVKESVI TKEYLTISGC SVKDNVVASV DNNMIIKSEG VTLEPISSDI 540 YEFADEKGDS VLDLILASNK ESACKASEAL TRPLPADEHK LDIWSTNAFS QNQCLVKERF 600 AKRKRLLKFK ERVITLKYRA YQSLWKESFH VPPVRKLRAK SQKKYQLSLW TNYSGYQKNR 660 SSIRFRMPSP AGNLNHPVSN AEILKHMSMQ LSSPQIKQYR TTLKMPALIL DQKDKMASRF 720 ISNNGLVENP CAVEKERAMI NPWSSEEKDV FMEKLDCFGK DFGKIASFLD HKTTADCIEF 780 YYKNHKSDCF EKTKKLEFGK KVKSTSNYLM TTGKKWNSEA NAASLDMLGA AMVRAHKYSS 840 SRPGGRTAYC TTQFDDDLSE RPKSFHGFGN EREKVAADVL AGICGSLSSE ALGSCVTSNF 900 DRGDGSQDLK CKMGGATTIL RRRITNNVPQ CVDDEIFSDE SCGEMDPSYW TDGEKSHFIE 960 AVSVYGKNFS MISTHVGSKS TDQCKVFFSK ARKCLGLDVL CSAKKMPEDG NSHGASANGG 1020 DCEAGVDTKD AFPCKWVSSQ MVDDLPKSVT SISGGETESK NLQSIHQEVK ESNPSSKTCS 1080 NAAVDAMGSD DACNRKDGFL SGFDDDCQSV NSTHNKNGLV LEQRHALVSA ETAKEQGISA 1140 LVAALVGNDS NAETKGRVSD KAHSHTADNS SMPLNTHVIS LSKEEQGCHH VRVHSRSLSD 1200 SEQSSRNGDL KLFGQILTHS SSVPSSKSGS SENGNRTELH HKLKCRLKVN SHGNLITAKF 1260 DRKNSSGQEE DAPSRSYGFW DGSRMRTGFS SLPDPTTLLS RYPTFDHCSK TVSLIEQQPI 1320 CNGQKSNSNQ MSEVNSSKVG IIVGKNCNDD DDDDASDTKL HCNKAAEGGG GS

Sequence ? help Back to Top

Protein Sequence Length: 1372 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSSSHGSR EFSRWGSGDF RRPPGHGRQG  60
GWHVFSDEYG HGYGPSMSFN NKMLENVSSR PSVSHGDGKY PRNARESRSF SQRDWKGHSW  120
TTSNGSTNSG GRLQHDLNYD QRDKVKGQHD KVDDVNGLGT NQRRDQEYSV SSSGWKPLKW  180
TRSGALSSRT STSGHSSSTR IAGALDSNEA KSETVLKNAL QNLSPSADSA ECAMSSLPYD  240
EATVRKKPRL GWGEGLAKYE KKKVEVPDAT AFTNVHAEST HSLNSSLIEK GPRCSGFSDR  300
TSPAPHSFVI SGSSPGGDEK SSGKASIDND VSDLHGSPGS GFQNQYEGTS SVEKLNDFSI  360
AKLCAPLIPL LQSSDSISED SSFMSSTALS KLLLYKKEIS KVLETTESEI DLLENELKGL  420
ISDSKGYFSF PLASRSFLEG DKYFEEKNDV TNTVATMPVV TSANTISKPM EHSTSDLEEV  480
PADAKGMDRS GRLDVKESVI TKEYLTISGC SVKDNVVASV DNNMIIKSEG VTLEPISSDI  540
YEFADEKGDS VLDLILASNK ESACKASEAL TRPLPADEHK LDIWSTNAFS QNQCLVKERF  600
AKRKRLLKFK ERVITLKYRA YQSLWKESFH VPPVRKLRAK SQKKYQLSLW TNYSGYQKNR  660
SSIRFRMPSP AGNLNHPVSN AEILKHMSMQ LSSPQIKQYR TTLKMPALIL DQKDKMASRF  720
ISNNGLVENP CAVEKERAMI NPWSSEEKDV FMEKLDCFGK DFGKIASFLD HKTTADCIEF  780
YYKNHKSDCF EKTKKLEFGK KVKSTSNYLM TTGKKWNSEA NAASLDMLGA AMVRAHKYSS  840
SRPGGRTAYC TTQFDDDLSE RPKSFHGFGN EREKVAADVL AGICGSLSSE ALGSCVTSNF  900
DRGDGSQDLK CKMGGATTIL RRRITNNVPQ CVDDEIFSDE SCGEMDPSYW TDGEKSHFIE  960
AVSVYGKNFS MISTHVGSKS TDQCKVFFSK ARKCLGLDVL CSAKKMPEDG NSHGASANGG  1020
DCEAGVDTKD AFPCKWVSSQ MVDDLPKSVT SISGGETESK NLQSIHQEVK ESNPSSKTCS  1080
NAAVDAMGSD DACNRKDGFL SGFDDDCQSV NSTHNKNGLV LEQRHALVSA ETAKEQGISA  1140
LVAALVGNDS NAETKGRVSD KAHSHTADNS SMPLNTHVIS LSKEEQGCHH VRVHSRSLSD  1200
SEQSSRNGDL KLFGQILTHS SSVPSSKSGS SENGNRTELH HKLKCRLKVN SHGNLITAKF  1260
DRKNSSGQEE DAPSRSYGFW DGSRMRTGFS SLPDPTTLLS RYPTFDHCSK TVSLIEQQPI  1320
CNGQKSNSNQ MSEVNSSKVG IIVGKNCNDD DDDDASDTKL HCNKAAEGGG GS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-123	MYB family protein