PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022993359.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | LBD | ||||||||
Protein Properties | Length: 170aa MW: 18923.6 Da PI: 7.3715 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 137.7 | 4e-43 | 6 | 105 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrr+C+++Cvlapyfp ++p kfa+vh++FGasnv+k+l++lp ++r da+sslvyeA+ar+rdPvyG++g i++lq+q+++l+a+la XP_022993359.1 6 PCAACKILRRRCVDECVLAPYFPPTEPLKFAAVHRIFGASNVIKFLQELPGNQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSELQAQLA 100 7********************************************************************************************** PP DUF260 96 llkee 100 l+k+e XP_022993359.1 101 LAKAE 105 99976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MVVLSPCAAC KILRRRCVDE CVLAPYFPPT EPLKFAAVHR IFGASNVIKF LQELPGNQRA 60 DATSSLVYEA NARIRDPVYG CTGSIFQLQN QVSELQAQLA LAKAEVHKMQ AQNANLLALI 120 CTETSQVQVE GREVPVLRQD HFPFTDLNSI PHNYKSSNIV WDSSWTSSSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07900.1 | 3e-60 | LBD family protein |