PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022993229.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 278aa MW: 30993.5 Da PI: 10.5604 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 306.4 | 1e-93 | 1 | 278 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkll 82 md d+ + rn+gyyep+ lk lglql+s+iaer k r+ + + + ++a+++r+ ++ rd ++++ + nk++ XP_022993229.1 1 MDGDALNMRNWGYYEPS--LKPPLGLQLISTIAERGVKHflpgRDPSA-IVNINGAFHSREsvvseesvpTNW-ARDGWMNH-------QSNKFF 84 99999988*******99..*******************9999766665.99**********888888887777.88889888.......99**** PP GAGA_bind 83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177 ++l+ ++s ++ l +t+ + l l+++ + + e +l iee ++++k +k++kkrq++ pk+++ kk++k + k XP_022993229.1 85 NMLPPNTS--------YSLLAQTSAPQPLPI-----LQPHDTS--RDE--MVLRIEE-PSVKKGAKQSKKRQNGGAPKTPNPKKPRK--P----K 155 ****8886........667777777776665.....4444333..223..3344444.6777888999999************9999..2....2 PP GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272 ++ +s+ +++ka+kk++dlv+ng ++D+s++P+PvCsCtG+++qCY+WG GGWqSaCCtt++Sv+PLP+s krrgaRiagrKmSqgafkk+LekL XP_022993229.1 156 NNDPSV-QQVKAPKKKLDLVINGFNMDISSIPIPVCSCTGTPHQCYRWGYGGWQSACCTTSLSVHPLPMSEKRRGARIAGRKMSQGAFKKVLEKL 249 333443.579************************************************************************************* PP GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301 aaeGy++snp+DL++hWA+HGtnkfvtir XP_022993229.1 250 AAEGYNFSNPIDLRSHWARHGTNKFVTIR 278 ****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MDGDALNMRN WGYYEPSLKP PLGLQLISTI AERGVKHFLP GRDPSAIVNI NGAFHSRESV 60 VSEESVPTNW ARDGWMNHQS NKFFNMLPPN TSYSLLAQTS APQPLPILQP HDTSRDEMVL 120 RIEEPSVKKG AKQSKKRQNG GAPKTPNPKK PRKPKNNDPS VQQVKAPKKK LDLVINGFNM 180 DISSIPIPVC SCTGTPHQCY RWGYGGWQSA CCTTSLSVHP LPMSEKRRGA RIAGRKMSQG 240 AFKKVLEKLA AEGYNFSNPI DLRSHWARHG TNKFVTIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14685.1 | 9e-94 | BBR-BPC family protein |