PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022993217.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 281aa    MW: 31891.1 Da    PI: 6.307
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022993217.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.42.2e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+  +   G  +W+++++  g+ R++k+c++rw +yl
   XP_022993217.1 14 KGPWTAEEDQKLISFILNNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding50.83.9e-1671111547
                      -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++ E++  +d++ qlG++ W++Ia++++ gRt++++k++w+++
   XP_022993217.1  71 SEYEEKMVIDLHSQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 111
                      6779**************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MGRQPCCDKV GLKKGPWTAE EDQKLISFIL NNGQCCWRAV PKLAGLLRCG KSCRLRWTNY  60
LRPDLKRGLL SEYEEKMVID LHSQLGNRWS KIASHLPGRT DNEIKNHWNT HIKKKLRKMA  120
IDPQTHKLIS PTDDTHLSQK DQNHRKSQRK QPPPLPSPPK ELKNEVAYNE INTMDLIIDG  180
FCTEEVPLIE PHEILVPCAS SSSTATTSYS SSMSTSTSSL CSNSESAANL LQDLANEFPE  240
FEWPNICENG IVEELLEDDF GSTWDFVANN YGLESWPYGF L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16600.16e-90MYB family protein