PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022993132.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 726aa MW: 81193.4 Da PI: 4.5432

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022993132.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.9	7.3e-11	574	617	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r +W++ + e++++av+q+G++ + I + ++ gRt+ q+k+++ + XP_022993132.1 574 RTKWSKHDTERFYEAVRQFGTD-FCMIQQLFP-GRTRHQIKLKFKN 617 789*****************.*****.********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 726 aa Download sequence
MDPFDEILSD PGFTSRTGGR FQPKIKPRPK KQTLAPQLST VSQDKKGTTS DAKSCHDVRG 60 NTKSIKSSSQ LAVIEENKES EDDLLLATVD STQLDLDSCG GILPSGSTID GPVGVENLTD 120 DSKNSGILNC SHSSASGAHE ATVLGQSGLG SIQPEDGHSN DGKIAGQNTD VFYDLEWLDD 180 FHNQPKNEAD PSSLKQATIS NEDGDLDKQR LEVEECGAGA NITEDTISSG TTTEQPACKY 240 IPKPKMRIAG DSCTQISQPE ISNTLPPSPQ VISCDTKCMH EASIGTHSDG VLNDSSINFD 300 DYSPVNQHIE APVNVESLAY DSYGDILVDD FNSDDQDEML REEGGKNGEE DPSSRSNMSQ 360 QQEMFPPVGE EIEHSKTSRK LRQQVSHQLG DPEDGVDDFP SERFSNCDIH GDGYKKNETS 420 KGRRGTKTKT KSLKPSSDNE KPTRKRKEAN KAVPDLQAEK RPKKFSHSTR RNRRQVNKVL 480 LETPEDEIDF QKISFRDLII YHEHKEKLEK KEATTRQSAT NQRTDTVGEE IYNDGEESLA 540 DEQGRGTDDD ETPDVVDMTS AYFNYHSFMD KTSRTKWSKH DTERFYEAVR QFGTDFCMIQ 600 QLFPGRTRHQ IKLKFKNEER HHPFRLSDAI TNRAKDHSQF LSLIGQLQEA ANKAKHESNE 660 DELTENTGNE ELGELSPEIN EEEVAKPGEV EDTKMEEFVG EIHSPLKADE SDDDDPHRWD 720 EYKFDY

Sequence ? help Back to Top

Protein Sequence Length: 726 aa Download sequence

MDPFDEILSD PGFTSRTGGR FQPKIKPRPK KQTLAPQLST VSQDKKGTTS DAKSCHDVRG  60
NTKSIKSSSQ LAVIEENKES EDDLLLATVD STQLDLDSCG GILPSGSTID GPVGVENLTD  120
DSKNSGILNC SHSSASGAHE ATVLGQSGLG SIQPEDGHSN DGKIAGQNTD VFYDLEWLDD  180
FHNQPKNEAD PSSLKQATIS NEDGDLDKQR LEVEECGAGA NITEDTISSG TTTEQPACKY  240
IPKPKMRIAG DSCTQISQPE ISNTLPPSPQ VISCDTKCMH EASIGTHSDG VLNDSSINFD  300
DYSPVNQHIE APVNVESLAY DSYGDILVDD FNSDDQDEML REEGGKNGEE DPSSRSNMSQ  360
QQEMFPPVGE EIEHSKTSRK LRQQVSHQLG DPEDGVDDFP SERFSNCDIH GDGYKKNETS  420
KGRRGTKTKT KSLKPSSDNE KPTRKRKEAN KAVPDLQAEK RPKKFSHSTR RNRRQVNKVL  480
LETPEDEIDF QKISFRDLII YHEHKEKLEK KEATTRQSAT NQRTDTVGEE IYNDGEESLA  540
DEQGRGTDDD ETPDVVDMTS AYFNYHSFMD KTSRTKWSKH DTERFYEAVR QFGTDFCMIQ  600
QLFPGRTRHQ IKLKFKNEER HHPFRLSDAI TNRAKDHSQF LSLIGQLQEA ANKAKHESNE  660
DELTENTGNE ELGELSPEIN EEEVAKPGEV EDTKMEEFVG EIHSPLKADE SDDDDPHRWD  720
EYKFDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	1e-36	MYB_related family protein