PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022993082.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 556aa MW: 63422.7 Da PI: 6.3502

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022993082.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182.8	8.2e-57	21	148	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g+++el evi+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v XP_022993082.1 21 LPPGFRFHPTDEELVAYYLKRKINGREIEL-EVIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVN 114 79**************************.99***********6434555777********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s ++++vg+kktLv+y+grap+g +t+Wvmheyrl XP_022993082.1 115 S-ESRAVGMKKTLVYYRGRAPHGARTNWVMHEYRL 148 9.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MVFIVYACFC RVLCVMAPVS LPPGFRFHPT DEELVAYYLK RKINGREIEL EVIPEVDLYK 60 CEPWDLPGKS LLPSKDLEWY FFSPRDRKYP NGSRTNRATK AGYWKATGKD RKVNSESRAV 120 GMKKTLVYYR GRAPHGARTN WVMHEYRLDD REIEVVCSGL QDAYALCRVF KKNTIIAPKI 180 EHNHQYCNIT LSSNQFVNND QSSELYSEGR CEEPESSWSQ FLSQEAFNSA TLFPSYANIP 240 YPPSKVDIAL ECARLQHRFT LPPLEVEDFP HPGYSDRFKT PIPTNPTMLD GGSSEALANQ 300 SWDGGIGNAY ACSKEYFTFM DTKDGFEDWN SIARFDVESF WEDPYSKCFD VGNAGDDIVV 360 ENFRWVGISN KDLDKNCMED SKLIPIHNIS NFQIEDHQNH LQDQPMNPDN YVVEGSGTSA 420 NHLRSQSFEV VEEMKVNHGL FMSTRQAAET LFHQTMPSET VKVQSLRCLV APNLSSRHER 480 TAQKTGSSLL LSGSCLKKTW SKFQRKMGSV LEAVLNEDEE HRSKKGEALN MILMNTRIFF 540 SIASLAVCSI CLAKLY

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MVFIVYACFC RVLCVMAPVS LPPGFRFHPT DEELVAYYLK RKINGREIEL EVIPEVDLYK  60
CEPWDLPGKS LLPSKDLEWY FFSPRDRKYP NGSRTNRATK AGYWKATGKD RKVNSESRAV  120
GMKKTLVYYR GRAPHGARTN WVMHEYRLDD REIEVVCSGL QDAYALCRVF KKNTIIAPKI  180
EHNHQYCNIT LSSNQFVNND QSSELYSEGR CEEPESSWSQ FLSQEAFNSA TLFPSYANIP  240
YPPSKVDIAL ECARLQHRFT LPPLEVEDFP HPGYSDRFKT PIPTNPTMLD GGSSEALANQ  300
SWDGGIGNAY ACSKEYFTFM DTKDGFEDWN SIARFDVESF WEDPYSKCFD VGNAGDDIVV  360
ENFRWVGISN KDLDKNCMED SKLIPIHNIS NFQIEDHQNH LQDQPMNPDN YVVEGSGTSA  420
NHLRSQSFEV VEEMKVNHGL FMSTRQAAET LFHQTMPSET VKVQSLRCLV APNLSSRHER  480
TAQKTGSSLL LSGSCLKKTW SKFQRKMGSV LEAVLNEDEE HRSKKGEALN MILMNTRIFF  540
SIASLAVCSI CLAKLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-135	NAC family protein