PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022992884.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family BBR-BPC
Protein Properties Length: 281aa    MW: 31236.7 Da    PI: 10.1374
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022992884.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind335.81.2e-10212811301
       GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkll 82 
                     mddd+ + rn+gyyep+  +k +lglqlms+++erd k     r+  + + + ++++++rd         m++  rd++  +        ++++l
  XP_022992884.1   1 MDDDALNMRNWGYYEPS--FKGHLGLQLMSTMSERDIKHylpgRDPSV-MVNANGSFHPRDcvvseapvhMNY-VRDNWGGN-------PRDRFL 84 
                     9***9999*******99..*******************9999999999.9***********888888888888.78888777.......56789* PP

       GAGA_bind  83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelree..eklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkkseksk 175
                     ++l+++++        + v+++t+ ++slq      l++++    e+  + +e++p++++  +ak+++     ++++ pk++kakk++k    +k
  XP_022992884.1  85 NMLPANHN--------YPVIPETSGAHSLQI-----LQPPSSSRDEMagSRVEEPPVKKEGGKAKKRQ-----SNEAGPKTPKAKKPRK----PK 157
                     ****9997........889*********999.....45544443333003444555555444443333.....3344555555555555....22 PP

       GAGA_bind 176 kkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLe 270
                     ++++++   +r+k +kk+idlv+ng+++D+s++P+PvCsCtGa++qCY+WG+GGWqSaCCtt+iS+yPLP+s krrgaRiagrKmSqgafkk+Le
  XP_022992884.1 158 DTSTAAV--QRVKPPKKNIDLVINGIDMDISGIPIPVCSCTGAPHQCYRWGCGGWQSACCTTNISTYPLPMSDKRRGARIAGRKMSQGAFKKVLE 250
                     2333333..689*********************************************************************************** PP

       GAGA_bind 271 kLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     kLaa+Gy+++np+DL++hWA+HGtnkfvtir
  XP_022992884.1 251 KLAADGYNFANPIDLRTHWARHGTNKFVTIR 281
                     ******************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MDDDALNMRN WGYYEPSFKG HLGLQLMSTM SERDIKHYLP GRDPSVMVNA NGSFHPRDCV  60
VSEAPVHMNY VRDNWGGNPR DRFLNMLPAN HNYPVIPETS GAHSLQILQP PSSSRDEMAG  120
SRVEEPPVKK EGGKAKKRQS NEAGPKTPKA KKPRKPKDTS TAAVQRVKPP KKNIDLVING  180
IDMDISGIPI PVCSCTGAPH QCYRWGCGGW QSACCTTNIS TYPLPMSDKR RGARIAGRKM  240
SQGAFKKVLE KLAADGYNFA NPIDLRTHWA RHGTNKFVTI R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-110BBR-BPC family protein