PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022992784.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 482aa MW: 52680.9 Da PI: 5.2421

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022992784.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.7	2.4e-09	299	347	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq XP_022992784.1 299 NSHSLAERVRREKISERMRLLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 347 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MNGKDEFEDE SRRSDPMSIT SGWQFAGAVS NEDLSVSSCP STSMSNLFTP TLMNSGFCSS 60 FNEQNSIVTG EGLNSLRSNG VDWSQQNPWM KGVFSGNVHG FPANLSQLPA DSAFIERAAR 120 FSCFNSRVFG ASPPVGPFDI SNSIGIHSRQ EVMSRNGAST DGSLPMELEA KEKSPSKNEK 180 ESEMSQARGK ESDEAGFSGG HGERCVLEGT ITEPSMDELC LKKRKRDEQN IELGQVKEAP 240 QQVNGTAKNG ASNQQKGTQN PSSTTNNPAE KQGKQDSQPS DTPKEEYIHV RARRGQATNS 300 HSLAERVRRE KISERMRLLQ DLVPGCSKVT GKAVMLDEII NYVQSLQRQV EFLSMKLATV 360 NPRLDFNIEE LLTKEIIQSK AGPSLFSFPP DMPMPYLPQH PSHLGLIPPC LPNMASSPDL 420 LRRTINSQLT SLVGGFKEPV QLLQIPNGWE NELHNAVPMS FDVAAPTSGQ DVDGTICSSL 480 PM

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MNGKDEFEDE SRRSDPMSIT SGWQFAGAVS NEDLSVSSCP STSMSNLFTP TLMNSGFCSS  60
FNEQNSIVTG EGLNSLRSNG VDWSQQNPWM KGVFSGNVHG FPANLSQLPA DSAFIERAAR  120
FSCFNSRVFG ASPPVGPFDI SNSIGIHSRQ EVMSRNGAST DGSLPMELEA KEKSPSKNEK  180
ESEMSQARGK ESDEAGFSGG HGERCVLEGT ITEPSMDELC LKKRKRDEQN IELGQVKEAP  240
QQVNGTAKNG ASNQQKGTQN PSSTTNNPAE KQGKQDSQPS DTPKEEYIHV RARRGQATNS  300
HSLAERVRRE KISERMRLLQ DLVPGCSKVT GKAVMLDEII NYVQSLQRQV EFLSMKLATV  360
NPRLDFNIEE LLTKEIIQSK AGPSLFSFPP DMPMPYLPQH PSHLGLIPPC LPNMASSPDL  420
LRRTINSQLT SLVGGFKEPV QLLQIPNGWE NELHNAVPMS FDVAAPTSGQ DVDGTICSSL  480
PM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-81	bHLH family protein