PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022992283.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 387aa MW: 44348.4 Da PI: 4.4554

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022992283.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	47.6	4.3e-15	153	237	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmre.rgferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e+ +L++a e+ + +r++l+ W+ev++k++e ++ r+ +qC+++++ l+k+ykk+k + + +s+s+++yf++++ XP_022992283.1 153 WNEHETVVLLDAWGERFLQHGRKSLRSEEWQEVAEKVSEvSKIDRTDTQCRNRLDTLKKKYKKEKSKSTEM-GGSTSKWVYFKKMD 237 ***********************************762678*********************996.88999******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MDNGEEKYPL SERYSGNHRE SYGSLPRSKI PHRDASYSRP VANQYVDDDV EDDDEEEEGL 60 GDEEDENDQN NGFAHTSEEV DDGDDEDDFD MDEDNKQNNT VKLDDVDLER HPKKRRLKNL 120 VSNYELAPRM PASSSATMAQ KSFVGGRNSL TDWNEHETVV LLDAWGERFL QHGRKSLRSE 180 EWQEVAEKVS EVSKIDRTDT QCRNRLDTLK KKYKKEKSKS TEMGGSTSKW VYFKKMDMLM 240 SSPPNQGGLS CGLDSGEYVF MNPRAYLNRA NGFDEMRDSP DNSESDDCED DELDGLPPKK 300 RMHGRNSDDG SSFRMLADSI HKFSEIYEKI ESSKRHQMME LEKMRMDFLR DLELQKRQIM 360 ESAQAEIAKL GQGDDEEYGA SAKSASG

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MDNGEEKYPL SERYSGNHRE SYGSLPRSKI PHRDASYSRP VANQYVDDDV EDDDEEEEGL  60
GDEEDENDQN NGFAHTSEEV DDGDDEDDFD MDEDNKQNNT VKLDDVDLER HPKKRRLKNL  120
VSNYELAPRM PASSSATMAQ KSFVGGRNSL TDWNEHETVV LLDAWGERFL QHGRKSLRSE  180
EWQEVAEKVS EVSKIDRTDT QCRNRLDTLK KKYKKEKSKS TEMGGSTSKW VYFKKMDMLM  240
SSPPNQGGLS CGLDSGEYVF MNPRAYLNRA NGFDEMRDSP DNSESDDCED DELDGLPPKK  300
RMHGRNSDDG SSFRMLADSI HKFSEIYEKI ESSKRHQMME LEKMRMDFLR DLELQKRQIM  360
ESAQAEIAKL GQGDDEEYGA SAKSASG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	119	PKKRRLKN
2	113	118	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	1e-68	Trihelix family protein