PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022992241.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 483aa    MW: 55501.5 Da    PI: 8.6363
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022992241.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.51.1e-08428451125
                     --S---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaH 25 
                     yk+ +Cr++a  G C+yG++CkF+H
  XP_022992241.1 428 YKQQRCRYYAV-GRCHYGENCKFSH 451
                     99*********.************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 483 aa     Download sequence    
MAFSGNFVTD PRRFELEELI DEHGESDDQC NSDDSECDPS YGFEEDNTNS KVSIRKKSKP  60
SEVEDRELIA QAYLDDVAPE VLNLNENDEK DISEVLSIIK AGKLEKLKVE QCKAYLRKNG  120
LRLTGTKDVL IQRINEHLEI LNGGGEKKYP EYSFTVNCKG DACMGDVVMF EQKVYEMYNI  180
ASRSSIGPSC GTRIVAGRIV KESYGASKQQ HTFTIEVLWS KGEKPLPPLH PLLIKGRNLY  240
RMKTLRQTWE DEGERQKVLM EKHARGSLAR STREARVVEK EKRKTHNENR KSRREGFNEN  300
PSKSNLSSAG TMLAETMVKL SVDARKAVHP HQEKPLFGHS GEPRQHNPTK QTKSDVFIDH  360
SRRPYQLQPM VNPVQNNYFS QPQMKADPPP VSYNIHPSIY SADHPASRLA MGQMNLYPKV  420
NQHAQESYKQ QRCRYYAVGR CHYGENCKFS HEMAQDFAGR EKERLGRHHH HHHQMHQNAR  480
LCR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1282286KRKTH