PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022992241.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C3H | ||||||||
Protein Properties | Length: 483aa MW: 55501.5 Da PI: 8.6363 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 26.5 | 1.1e-08 | 428 | 451 | 1 | 25 |
--S---SGGGGTS--TTTTT-SS-S CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaH 25 yk+ +Cr++a G C+yG++CkF+H XP_022992241.1 428 YKQQRCRYYAV-GRCHYGENCKFSH 451 99*********.************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 483 aa Download sequence |
MAFSGNFVTD PRRFELEELI DEHGESDDQC NSDDSECDPS YGFEEDNTNS KVSIRKKSKP 60 SEVEDRELIA QAYLDDVAPE VLNLNENDEK DISEVLSIIK AGKLEKLKVE QCKAYLRKNG 120 LRLTGTKDVL IQRINEHLEI LNGGGEKKYP EYSFTVNCKG DACMGDVVMF EQKVYEMYNI 180 ASRSSIGPSC GTRIVAGRIV KESYGASKQQ HTFTIEVLWS KGEKPLPPLH PLLIKGRNLY 240 RMKTLRQTWE DEGERQKVLM EKHARGSLAR STREARVVEK EKRKTHNENR KSRREGFNEN 300 PSKSNLSSAG TMLAETMVKL SVDARKAVHP HQEKPLFGHS GEPRQHNPTK QTKSDVFIDH 360 SRRPYQLQPM VNPVQNNYFS QPQMKADPPP VSYNIHPSIY SADHPASRLA MGQMNLYPKV 420 NQHAQESYKQ QRCRYYAVGR CHYGENCKFS HEMAQDFAGR EKERLGRHHH HHHQMHQNAR 480 LCR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 282 | 286 | KRKTH |