PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022992149.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB_related | ||||||||
Protein Properties | Length: 736aa MW: 81221 Da PI: 5.9339 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.6 | 4.4e-16 | 24 | 68 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ XP_022992149.1 24 RERWTEEEHNRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78******************88.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 736 aa Download sequence |
MEPNSSGEDL VFKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEALIKG IPVGQTLDID IPPPRPKRKP SNPYPRKTPI SKLGANDGKL 120 LTLVSSSQSK QILDLEKEPL NEATSGEEQA TSEMDTHDDN CSEVFTLSRE ANFFSWKNKN 180 SVPAQVKLNL NDLCAFREFV PSFKELDAKQ PLHDKGRGKV SEFEIASASQ EKIVSAEKKE 240 SLSCVLSGDE MQVAHNYPRH VPVHVVDGSL GTNVQESVTD TPLQESSFNP AMEIPGEHNI 300 HRNPSDSVSL ERQNNAPRCI YQSYPTVHPT PFTLLPPNQE NYKSLLHMSS SFSNLVVSTL 360 QQNPAAHAIA SLTATCWPYV NPEASVDSPM CDKESFRTKQ MNSTPSMEAI ATATVAAATA 420 WWAAHGLLPL CAPFHSAFTS SAISAPVAQP SDTCPNPESK DKAESSMQID AEQSEALTAQ 480 HSGSKSPTHS SSDSEGSGGA NANANATVKP AHDEKTPAEV EFHDSNKGKR GKQVDRSSCG 540 SNTPSGSDQE IDATENNDKE EKEEKELEMN CPASESSNRR SRCISNINES WKEVSDEVKR 600 GRLAFQALFT RDILPQSFSP SYNVENENEK NENVEKDSNI IDKDSCASVM DLSSKICGPS 660 RDQVMERYTS ATGDNNGEGK ILTIGQGNGT PKGCRTGFKP YKRCSVEAKE KRMTTSSNHS 720 EEGDQKRLRL EQKATN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01060.4 | 8e-96 | MYB_related family protein |