PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022992035.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 650aa MW: 71848.9 Da PI: 5.9446

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022992035.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.7	0.0005	485	522	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le++++++ Lq XP_022992035.1 485 RQLIQDRIKELRELVPNgA------KCSIDSLLERTIKHMLFLQ 522 67799************77......7777779999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 650 aa Download sequence
MGTDDLHQIL KSFCFNSEWK YAVFWKLKHR ARMMLTWEDG YYDNSEQYEP PKSKFYRKTL 60 EKFHDGHYSH DPLGLAVAKM SYHVYSLGEG IVGQVAVTGK HQWITADEQI QNISSTLEYC 120 DGWQTQFLAG IKTIVVVAVV PHGVLQLGSL DKVTEDVNVV AHIRNVFLTL QESSAGHIEP 180 MPSCKSSGYM KSEDESVSKN VGIELSGSGG NESLKTQPDA INVESFKSQA RLLDDRICGG 240 EPSGYKDMAV DLKQKFNAPS QNSAMDITND ACFPVNHNAM FSRTNPTQMY LQNDVEASED 300 GCPSNASLKF PAGYELHEVL GPAFLKDALY LDWQTEYVFG GRASNLSEGM SSSQLTSDSP 360 MEHLLEAVVA DVCYSGSDVK SDTSLCKSGQ SLLTSERIPE PSTNVTTSAC SEGYSMGQSR 420 TSFIGEDMPN SLSSSGICGV MSPKGFSSTY SGTGSERLEK SSEPGKNSKR RARPGESCRP 480 RPRDRQLIQD RIKELRELVP NGAKCSIDSL LERTIKHMLF LQGISKHVDK LNKCANMKKE 540 NGRMGTSNTD QGSSWAVEVG GQLKVCSIIV ESLNKNGQIL VEMLCEECSH FLEIAEAIRS 600 LGFTILKGIT EAHGDKTWIC FVVEGENNRN IHRMDILWSL VQILQRSNTS

Sequence ? help Back to Top

Protein Sequence Length: 650 aa Download sequence

MGTDDLHQIL KSFCFNSEWK YAVFWKLKHR ARMMLTWEDG YYDNSEQYEP PKSKFYRKTL  60
EKFHDGHYSH DPLGLAVAKM SYHVYSLGEG IVGQVAVTGK HQWITADEQI QNISSTLEYC  120
DGWQTQFLAG IKTIVVVAVV PHGVLQLGSL DKVTEDVNVV AHIRNVFLTL QESSAGHIEP  180
MPSCKSSGYM KSEDESVSKN VGIELSGSGG NESLKTQPDA INVESFKSQA RLLDDRICGG  240
EPSGYKDMAV DLKQKFNAPS QNSAMDITND ACFPVNHNAM FSRTNPTQMY LQNDVEASED  300
GCPSNASLKF PAGYELHEVL GPAFLKDALY LDWQTEYVFG GRASNLSEGM SSSQLTSDSP  360
MEHLLEAVVA DVCYSGSDVK SDTSLCKSGQ SLLTSERIPE PSTNVTTSAC SEGYSMGQSR  420
TSFIGEDMPN SLSSSGICGV MSPKGFSSTY SGTGSERLEK SSEPGKNSKR RARPGESCRP  480
RPRDRQLIQD RIKELRELVP NGAKCSIDSL LERTIKHMLF LQGISKHVDK LNKCANMKKE  540
NGRMGTSNTD QGSSWAVEVG GQLKVCSIIV ESLNKNGQIL VEMLCEECSH FLEIAEAIRS  600
LGFTILKGIT EAHGDKTWIC FVVEGENNRN IHRMDILWSL VQILQRSNTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	1e-100	bHLH family protein