PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022992026.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C3H | ||||||||
Protein Properties | Length: 233aa MW: 26603.2 Da PI: 9.008 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 25.7 | 2e-08 | 94 | 115 | 4 | 25 |
---SGGGGTS--TTTTT-SS-S CS zf-CCCH 4 elCrffartGtCkyGdrCkFaH 25 + Cr f+r C yGd+C++ H XP_022992026.1 94 KACRQFQRRRKCAYGDQCRYLH 115 67******************** PP | |||||||
2 | zf-CCCH | 25.1 | 3.1e-08 | 175 | 198 | 2 | 25 |
-S---SGGGGTS--TTTTT-SS-S CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaH 25 kt+lC ++tG C+yG+ C+ aH XP_022992026.1 175 KTRLCYPLQKTGSCPYGAVCRIAH 198 8*******************9777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MSATYRFNEI TPPVPEARGD SSALPPPHSD SGLQQRTMPS KSRIPPSNNR NIGYDHELGC 60 MSTPALNDTH RRLPSLRGIE FHEGQLSGRS NEMKACRQFQ RRRKCAYGDQ CRYLHEIPEK 120 TRDFGSTTQN YEVRIVDSGH VMNRRRGLDQ LEEVRSKVQT EIVVRGEIPK PVRCKTRLCY 180 PLQKTGSCPY GAVCRIAHEE AGIDIVLVFF VFGENRTTKA WALHCCITTW ERI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19360.1 | 9e-12 | C3H family protein |