PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022992025.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C3H | ||||||||
Protein Properties | Length: 266aa MW: 30052.1 Da PI: 9.4359 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 25.4 | 2.4e-08 | 94 | 115 | 4 | 25 |
---SGGGGTS--TTTTT-SS-S CS zf-CCCH 4 elCrffartGtCkyGdrCkFaH 25 + Cr f+r C yGd+C++ H XP_022992025.1 94 KACRQFQRRRKCAYGDQCRYLH 115 67******************** PP | |||||||
2 | zf-CCCH | 24.8 | 3.7e-08 | 175 | 198 | 2 | 25 |
-S---SGGGGTS--TTTTT-SS-S CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaH 25 kt+lC ++tG C+yG+ C+ aH XP_022992025.1 175 KTRLCYPLQKTGSCPYGAVCRIAH 198 8*******************9777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
MSATYRFNEI TPPVPEARGD SSALPPPHSD SGLQQRTMPS KSRIPPSNNR NIGYDHELGC 60 MSTPALNDTH RRLPSLRGIE FHEGQLSGRS NEMKACRQFQ RRRKCAYGDQ CRYLHEIPEK 120 TRDFGSTTQN YEVRIVDSGH VMNRRRGLDQ LEEVRSKVQT EIVVRGEIPK PVRCKTRLCY 180 PLQKTGSCPY GAVCRIAHEE AELQKLGPFI AASQRGSVSD ASATTSAATQ VEIGIVCKNE 240 EPRMKQFFKS KKSKRLIAIY ADWLED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19360.1 | 1e-15 | C3H family protein |